Protein–RNA interactions for Protein: P27661

H2afx, Histone H2AX, mousemouse

Known RBP Predictions only

Length 143 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afxP27661 Gm11978-201ENSMUST00000122315 466 ntBASIC13.31□□□□□ -0.28
H2afxP27661 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
H2afxP27661 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC13.31□□□□□ -0.28
H2afxP27661 Gm13391-202ENSMUST00000147685 816 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H2afxP27661 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC13.31□□□□□ -0.28
H2afxP27661 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H2afxP27661 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
H2afxP27661 Gm9824-201ENSMUST00000178707 561 ntBASIC13.31□□□□□ -0.28
H2afxP27661 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.31□□□□□ -0.28
H2afxP27661 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC13.31□□□□□ -0.28
H2afxP27661 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afxP27661 Gm10819-201ENSMUST00000099988 561 ntBASIC13.31□□□□□ -0.28
H2afxP27661 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afxP27661 Stat5a-203ENSMUST00000107357 3605 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
H2afxP27661 E330021D16Rik-203ENSMUST00000204830 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afxP27661 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
H2afxP27661 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afxP27661 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afxP27661 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afxP27661 Olfr1419-202ENSMUST00000213954 2918 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
H2afxP27661 Fosb-201ENSMUST00000003640 3782 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afxP27661 Slc45a2-201ENSMUST00000117100 2983 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afxP27661 Tctn3-203ENSMUST00000135795 1686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
H2afxP27661 Tnfrsf22-203ENSMUST00000146692 2298 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
H2afxP27661 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.3□□□□□ -0.28
H2afxP27661 Camsap3-205ENSMUST00000207432 3865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Tcf4-240ENSMUST00000201781 2779 ntTSL 5 BASIC13.3□□□□□ -0.28
H2afxP27661 Gm33677-201ENSMUST00000220074 2765 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
H2afxP27661 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Gm24543-201ENSMUST00000103867 82 ntBASIC13.3□□□□□ -0.28
H2afxP27661 Gm11400-201ENSMUST00000120853 1214 ntBASIC13.3□□□□□ -0.28
H2afxP27661 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Gm18905-201ENSMUST00000205454 928 ntBASIC13.3□□□□□ -0.28
H2afxP27661 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Gm9229-201ENSMUST00000222777 126 ntBASIC13.3□□□□□ -0.28
H2afxP27661 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
H2afxP27661 Trim23-203ENSMUST00000069187 3546 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Ctsd-201ENSMUST00000066401 1922 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Asrgl1-201ENSMUST00000049948 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Wif1-201ENSMUST00000020439 2294 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Foxs1-201ENSMUST00000099200 1311 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
H2afxP27661 Ttll10-202ENSMUST00000051509 2304 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Ces2d-ps-201ENSMUST00000043209 1656 ntBASIC13.3□□□□□ -0.28
H2afxP27661 Arfgap1-201ENSMUST00000029092 2714 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Kirrel3-209ENSMUST00000190549 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC13.3□□□□□ -0.28
H2afxP27661 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Serpina11-201ENSMUST00000074693 1447 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Gm28043-201ENSMUST00000130871 6521 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
H2afxP27661 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Knop1-206ENSMUST00000126792 3253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
H2afxP27661 Zfp398-201ENSMUST00000079881 2906 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afxP27661 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afxP27661 Lgi4-201ENSMUST00000039775 4037 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afxP27661 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
H2afxP27661 Gm20427-201ENSMUST00000168978 3703 ntTSL 2 BASIC13.29□□□□□ -0.28
H2afxP27661 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.29□□□□□ -0.28
H2afxP27661 Ttc23-202ENSMUST00000107470 1915 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
H2afxP27661 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afxP27661 Ddx55-202ENSMUST00000111438 2737 ntTSL 2 BASIC13.29□□□□□ -0.28
H2afxP27661 Dcun1d2-201ENSMUST00000045366 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afxP27661 Rgs11-201ENSMUST00000025020 2006 ntAPPRIS P2 TSL 2 BASIC13.29□□□□□ -0.28
H2afxP27661 Nefl-201ENSMUST00000022639 3380 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afxP27661 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afxP27661 Rfesd-202ENSMUST00000167271 595 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
H2afxP27661 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afxP27661 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC13.29□□□□□ -0.28
H2afxP27661 Gm29608-201ENSMUST00000190444 463 ntBASIC13.29□□□□□ -0.28
H2afxP27661 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.29□□□□□ -0.28
H2afxP27661 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC13.29□□□□□ -0.28
H2afxP27661 AC132317.1-201ENSMUST00000227227 962 ntBASIC13.29□□□□□ -0.28
H2afxP27661 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afxP27661 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afxP27661 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H2afxP27661 Fam126a-203ENSMUST00000115109 2195 ntTSL 5 BASIC13.29□□□□□ -0.28
H2afxP27661 Btrc-209ENSMUST00000224478 2194 ntBASIC13.29□□□□□ -0.28
H2afxP27661 Aamp-202ENSMUST00000178235 1756 ntAPPRIS ALT1 TSL 5 BASIC13.29□□□□□ -0.28
H2afxP27661 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.29□□□□□ -0.28
H2afxP27661 Fam107b-201ENSMUST00000027965 3156 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afxP27661 Mmgt2-203ENSMUST00000129162 1828 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
H2afxP27661 Esrp1-204ENSMUST00000108313 3696 ntTSL 5 BASIC13.29□□□□□ -0.28
H2afxP27661 Myh3-202ENSMUST00000108689 6031 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
H2afxP27661 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
H2afxP27661 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H2afxP27661 Ces4a-201ENSMUST00000161289 2433 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afxP27661 Egfr-202ENSMUST00000102884 2943 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
H2afxP27661 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
H2afxP27661 Col9a1-202ENSMUST00000088349 3059 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
H2afxP27661 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afxP27661 Spon1-201ENSMUST00000046687 6161 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
H2afxP27661 Gripap1-202ENSMUST00000101694 2867 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms