Protein–RNA interactions for Protein: P25118

Tnfrsf1a, Tumor necrosis factor receptor superfamily member 1A, mousemouse

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf1aP25118 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Pex1-201ENSMUST00000006061 4433 ntAPPRIS P3 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC10.71□□□□□ -0.69
Tnfrsf1aP25118 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tnfrsf1aP25118 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tnfrsf1aP25118 AI597479-201ENSMUST00000010434 3458 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tnfrsf1aP25118 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tnfrsf1aP25118 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tnfrsf1aP25118 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tnfrsf1aP25118 Jade1-204ENSMUST00000170711 2896 ntTSL 5 BASIC10.71□□□□□ -0.7
Tnfrsf1aP25118 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC10.71□□□□□ -0.7
Tnfrsf1aP25118 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Nexmif-203ENSMUST00000118314 11476 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Me3-202ENSMUST00000032856 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Duoxa2-201ENSMUST00000028656 1592 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Polr3e-202ENSMUST00000106483 3001 ntAPPRIS P3 TSL 5 BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Itfg2-206ENSMUST00000203374 1394 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Olfml3-201ENSMUST00000029440 5465 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Ntrk2-202ENSMUST00000109838 6846 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Ptp4a3-204ENSMUST00000167582 2640 ntTSL 5 BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Ins2-204ENSMUST00000105932 455 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Rgs19-204ENSMUST00000108772 779 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Id1-202ENSMUST00000109824 1160 ntAPPRIS ALT2 BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Gm11618-201ENSMUST00000117946 267 ntBASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Sox2ot-216ENSMUST00000200092 767 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Gm8463-201ENSMUST00000208573 613 ntBASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Ins2-201ENSMUST00000000220 478 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Arid4a-201ENSMUST00000046305 4998 ntAPPRIS P1 TSL 5 BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Neu4-201ENSMUST00000050890 4511 ntAPPRIS P3 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Synpo-211ENSMUST00000155195 4442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Lrrc20-201ENSMUST00000049242 3216 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Tonsl-207ENSMUST00000168185 4235 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Pde1c-209ENSMUST00000203372 3147 ntAPPRIS ALT2 TSL 5 BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Parp2-201ENSMUST00000036126 1894 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Gadl1-203ENSMUST00000121770 1763 ntAPPRIS P2 TSL 5 BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Ctr9-201ENSMUST00000005749 4300 ntAPPRIS P1 TSL 1 (best) BASIC10.7□□□□□ -0.7
Tnfrsf1aP25118 Setd5-201ENSMUST00000042889 6755 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Gm26616-202ENSMUST00000195676 3107 ntBASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Capn9-201ENSMUST00000093033 2330 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Vsx1-201ENSMUST00000046095 3791 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Zkscan3-207ENSMUST00000223831 2101 ntBASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Terb2-201ENSMUST00000028661 2115 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Prr36-201ENSMUST00000168386 4616 ntAPPRIS P1 TSL 5 BASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Gm5638-201ENSMUST00000118618 1258 ntBASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Gm13612-201ENSMUST00000119276 390 ntBASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Gm14928-201ENSMUST00000120198 477 ntBASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Gm20412-201ENSMUST00000173249 633 ntTSL 5 BASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Gm28693-202ENSMUST00000190758 331 ntBASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Ighv5-13-201ENSMUST00000193550 290 ntBASIC10.69□□□□□ -0.7
Tnfrsf1aP25118 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC10.69□□□□□ -0.7
Retrieved 100 of 76,532 protein–RNA pairs in 35 ms