Protein–RNA interactions for Protein: P22518

Clk1, Dual specificity protein kinase CLK1, mousemouse

Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clk1P22518 AC162801.1-201ENSMUST00000220612 198 ntBASIC12□□□□□ -0.49
Clk1P22518 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Tas1r2-201ENSMUST00000030510 3047 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Kars-203ENSMUST00000164470 2189 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12□□□□□ -0.49
Clk1P22518 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Pcdhb18-201ENSMUST00000055949 5041 ntAPPRIS P1 BASIC12□□□□□ -0.49
Clk1P22518 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Yae1d1-204ENSMUST00000222796 1382 ntTSL 5 BASIC12□□□□□ -0.49
Clk1P22518 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 AC174678.2-201ENSMUST00000156420 3275 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Clk1P22518 Dlgap3-203ENSMUST00000106094 4207 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC12□□□□□ -0.49
Clk1P22518 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Pgm3-201ENSMUST00000070064 2666 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Insrr-201ENSMUST00000029711 5102 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Cidec-201ENSMUST00000032416 1703 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Clk1P22518 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 1700019D03Rik-202ENSMUST00000114492 3565 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Clk1P22518 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Clk1P22518 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Clk1P22518 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Gm43273-201ENSMUST00000199649 2594 ntBASIC11.99□□□□□ -0.49
Clk1P22518 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Pnkd-203ENSMUST00000087226 3054 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC11.99□□□□□ -0.49
Clk1P22518 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC11.99□□□□□ -0.49
Clk1P22518 Gm6447-201ENSMUST00000118905 835 ntBASIC11.99□□□□□ -0.49
Clk1P22518 Mir1894-201ENSMUST00000122802 81 ntBASIC11.99□□□□□ -0.49
Clk1P22518 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC11.99□□□□□ -0.49
Clk1P22518 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 AC122305.4-201ENSMUST00000216159 1206 ntBASIC11.99□□□□□ -0.49
Clk1P22518 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC11.99□□□□□ -0.49
Clk1P22518 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Olfr373-201ENSMUST00000074540 945 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Clk1P22518 Acy1-201ENSMUST00000024031 1529 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC11.99□□□□□ -0.49
Clk1P22518 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.99□□□□□ -0.49
Clk1P22518 Hexim2-201ENSMUST00000062530 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC11.99□□□□□ -0.49
Clk1P22518 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Mgmt-201ENSMUST00000081510 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Pkn1-208ENSMUST00000144258 2995 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Gm42957-201ENSMUST00000137564 3624 ntAPPRIS P1 TSL 2 BASIC11.99□□□□□ -0.49
Clk1P22518 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.99□□□□□ -0.49
Clk1P22518 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Cadm1-203ENSMUST00000114547 4444 ntAPPRIS P4 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Htr2c-207ENSMUST00000156697 4654 ntTSL 5 BASIC11.99□□□□□ -0.49
Clk1P22518 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Clk1P22518 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC11.99□□□□□ -0.49
Clk1P22518 C230024C17Rik-201ENSMUST00000190663 3337 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Wdr36-201ENSMUST00000053663 3281 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Zfp853-203ENSMUST00000212715 3133 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Clk1P22518 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 4930534D22Rik-201ENSMUST00000181438 2715 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Gm43051-201ENSMUST00000201096 2678 ntBASIC11.98□□□□□ -0.49
Clk1P22518 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Cryz-208ENSMUST00000192462 2505 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Armt1-201ENSMUST00000095893 2429 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Olfr283-202ENSMUST00000215830 2392 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Clk1P22518 Gm11476-201ENSMUST00000127006 2019 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Abhd6-203ENSMUST00000225234 1958 ntBASIC11.98□□□□□ -0.49
Clk1P22518 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Gm10040-201ENSMUST00000080726 1662 ntBASIC11.98□□□□□ -0.49
Clk1P22518 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Cog1-201ENSMUST00000018805 3935 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Gm8213-201ENSMUST00000118191 441 ntBASIC11.98□□□□□ -0.49
Clk1P22518 Spata3-209ENSMUST00000152501 743 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC11.98□□□□□ -0.49
Clk1P22518 1700092C10Rik-201ENSMUST00000172547 585 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC11.98□□□□□ -0.49
Clk1P22518 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Clk1P22518 B930036N10Rik-202ENSMUST00000181170 3544 ntBASIC11.98□□□□□ -0.49
Clk1P22518 Itgal-201ENSMUST00000106306 5195 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms