Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
BdnfP21237 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
BdnfP21237 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BdnfP21237 Srp54b-202ENSMUST00000218879 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BdnfP21237 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
BdnfP21237 Ldhd-201ENSMUST00000070004 2273 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Dnajb1-202ENSMUST00000212300 2854 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Oprd1-201ENSMUST00000056336 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.28□□□□□ -0.44
BdnfP21237 Sqle-202ENSMUST00000100640 2636 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
BdnfP21237 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 AC159195.1-201ENSMUST00000225867 2086 ntBASIC12.28□□□□□ -0.44
BdnfP21237 Zfp433-202ENSMUST00000200889 2384 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Gm32687-201ENSMUST00000220314 2379 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Clcnkb-201ENSMUST00000006378 2370 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Entpd4-206ENSMUST00000184973 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Entpd4b-204ENSMUST00000185072 3589 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
BdnfP21237 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Gm7104-201ENSMUST00000179741 2532 ntBASIC12.28□□□□□ -0.44
BdnfP21237 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12.28□□□□□ -0.44
BdnfP21237 Gm18307-201ENSMUST00000206864 949 ntBASIC12.28□□□□□ -0.44
BdnfP21237 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 AC158982.1-201ENSMUST00000228377 901 ntBASIC12.28□□□□□ -0.44
BdnfP21237 AC154276.1-201ENSMUST00000228874 1299 ntBASIC12.28□□□□□ -0.44
BdnfP21237 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
BdnfP21237 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC12.28□□□□□ -0.44
BdnfP21237 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
BdnfP21237 Dmbx1-201ENSMUST00000064806 5799 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Gm45833-201ENSMUST00000211931 2730 ntTSL 5 BASIC12.28□□□□□ -0.44
BdnfP21237 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.28□□□□□ -0.44
BdnfP21237 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Apopt1-203ENSMUST00000162316 3107 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Oxr1-203ENSMUST00000090096 4515 ntTSL 5 BASIC12.28□□□□□ -0.44
BdnfP21237 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
BdnfP21237 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
BdnfP21237 Arhgap12-211ENSMUST00000182383 2500 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
BdnfP21237 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
BdnfP21237 Dnajc14-207ENSMUST00000219508 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
BdnfP21237 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
BdnfP21237 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
BdnfP21237 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
BdnfP21237 Nrf1-206ENSMUST00000115204 2047 ntTSL 1 (best) BASIC12.27□□□□□ -0.44
BdnfP21237 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC12.27□□□□□ -0.44
BdnfP21237 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
BdnfP21237 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BdnfP21237 Epb41l2-207ENSMUST00000218903 4115 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BdnfP21237 Pif1-202ENSMUST00000131483 3309 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BdnfP21237 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BdnfP21237 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BdnfP21237 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.27□□□□□ -0.45
BdnfP21237 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC12.27□□□□□ -0.45
BdnfP21237 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BdnfP21237 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BdnfP21237 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC12.27□□□□□ -0.45
BdnfP21237 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BdnfP21237 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.45
BdnfP21237 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BdnfP21237 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
BdnfP21237 2410002F23Rik-214ENSMUST00000186606 748 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
BdnfP21237 Gm5626-201ENSMUST00000222151 1058 ntBASIC12.27□□□□□ -0.45
BdnfP21237 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.27□□□□□ -0.45
BdnfP21237 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
BdnfP21237 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC12.27□□□□□ -0.45
BdnfP21237 Thy1-201ENSMUST00000114840 1735 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
BdnfP21237 Egr1-202ENSMUST00000165033 3036 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
BdnfP21237 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BdnfP21237 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.27□□□□□ -0.45
BdnfP21237 Rnft2-202ENSMUST00000121369 4431 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BdnfP21237 Radil-203ENSMUST00000110784 3106 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
BdnfP21237 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC12.27□□□□□ -0.45
BdnfP21237 Gm18263-201ENSMUST00000220846 1928 ntBASIC12.27□□□□□ -0.45
BdnfP21237 Cdc25c-201ENSMUST00000060710 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BdnfP21237 Rasa3-201ENSMUST00000117551 4404 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BdnfP21237 Spata2-201ENSMUST00000057627 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BdnfP21237 Lmnb2-201ENSMUST00000057623 3531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
BdnfP21237 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
BdnfP21237 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BdnfP21237 Tcf7l2-207ENSMUST00000111653 2629 ntAPPRIS ALT2 TSL 2 BASIC12.26□□□□□ -0.45
BdnfP21237 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BdnfP21237 Smarcb1-202ENSMUST00000121304 1622 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BdnfP21237 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.26□□□□□ -0.45
BdnfP21237 Gm36987-201ENSMUST00000194704 2979 ntBASIC12.26□□□□□ -0.45
BdnfP21237 Chrna9-201ENSMUST00000031108 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
BdnfP21237 Hspa2-202ENSMUST00000219555 2526 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 62.8 ms