Protein–RNA interactions for Protein: P09025

Hoxc8, Homeobox protein Hox-C8, mousemouse

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxc8P09025 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Slc25a45-206ENSMUST00000155697 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Drg2-201ENSMUST00000018568 1788 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 AC123619.2-202ENSMUST00000225097 1568 ntBASIC13.51□□□□□ -0.25
Hoxc8P09025 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Hoxc8P09025 Cstl1-202ENSMUST00000109954 454 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Rpl36-ps10-201ENSMUST00000117431 216 ntBASIC13.51□□□□□ -0.25
Hoxc8P09025 A430060F13Rik-201ENSMUST00000124176 378 ntBASIC13.51□□□□□ -0.25
Hoxc8P09025 Mir1943-201ENSMUST00000158276 73 ntBASIC13.51□□□□□ -0.25
Hoxc8P09025 Gm9211-201ENSMUST00000182882 975 ntBASIC13.51□□□□□ -0.25
Hoxc8P09025 Olfr1347-205ENSMUST00000220413 964 ntBASIC13.51□□□□□ -0.25
Hoxc8P09025 AC158523.3-201ENSMUST00000220664 864 ntTSL 5 BASIC13.51□□□□□ -0.25
Hoxc8P09025 Azgp1-201ENSMUST00000035390 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Olfr1347-201ENSMUST00000036357 964 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Hoxc8P09025 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Dnajb12-205ENSMUST00000147914 3041 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Spop-202ENSMUST00000107724 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Per1-201ENSMUST00000021271 4671 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hoxc8P09025 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Hoxc8P09025 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Pde8b-207ENSMUST00000162153 2474 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC13.51□□□□□ -0.25
Hoxc8P09025 Treh-201ENSMUST00000034609 2048 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Hoxc8P09025 F7-201ENSMUST00000033820 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc8P09025 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Hoxc8P09025 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc8P09025 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC13.5□□□□□ -0.25
Hoxc8P09025 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Hoxc8P09025 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Hoxc8P09025 AC151895.1-201ENSMUST00000219025 1742 ntBASIC13.5□□□□□ -0.25
Hoxc8P09025 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc8P09025 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc8P09025 AL670603.1-201ENSMUST00000216692 1535 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Hoxc8P09025 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC13.5□□□□□ -0.25
Hoxc8P09025 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc8P09025 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc8P09025 Pnp2-201ENSMUST00000095925 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc8P09025 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc8P09025 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc8P09025 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.5□□□□□ -0.25
Hoxc8P09025 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc8P09025 Hexim2-202ENSMUST00000107037 1221 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
Hoxc8P09025 Tpm1-210ENSMUST00000113693 1054 ntTSL 5 BASIC13.5□□□□□ -0.25
Hoxc8P09025 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc8P09025 Gm9062-201ENSMUST00000117712 727 ntBASIC13.5□□□□□ -0.25
Hoxc8P09025 Mdk-ps1-201ENSMUST00000119782 321 ntBASIC13.5□□□□□ -0.25
Hoxc8P09025 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.5□□□□□ -0.25
Hoxc8P09025 Rps13-ps2-201ENSMUST00000182017 453 ntBASIC13.5□□□□□ -0.25
Hoxc8P09025 Gm43584-201ENSMUST00000199762 605 ntTSL 3 BASIC13.5□□□□□ -0.25
Hoxc8P09025 Gm270-201ENSMUST00000223010 976 ntBASIC13.5□□□□□ -0.25
Hoxc8P09025 Mrpl18-201ENSMUST00000079121 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc8P09025 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.5□□□□□ -0.25
Hoxc8P09025 Mcfd2-204ENSMUST00000144236 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc8P09025 Hao1-201ENSMUST00000028704 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc8P09025 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc8P09025 Mfsd13b-201ENSMUST00000033166 1883 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc8P09025 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Hoxc8P09025 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Hoxc8P09025 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Hoxc8P09025 Gm5385-201ENSMUST00000118988 1559 ntBASIC13.49□□□□□ -0.25
Hoxc8P09025 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc8P09025 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc8P09025 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc8P09025 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc8P09025 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC13.49□□□□□ -0.25
Hoxc8P09025 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc8P09025 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc8P09025 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc8P09025 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc8P09025 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc8P09025 Sgf29-201ENSMUST00000032956 1312 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc8P09025 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Hoxc8P09025 AC159308.2-201ENSMUST00000213592 2325 ntBASIC13.49□□□□□ -0.25
Hoxc8P09025 Gm22133-201ENSMUST00000102082 109 ntBASIC13.49□□□□□ -0.25
Hoxc8P09025 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Hoxc8P09025 Pmp22-203ENSMUST00000108701 723 ntAPPRIS P1 TSL 3 BASIC13.49□□□□□ -0.25
Hoxc8P09025 Bcas3os2-201ENSMUST00000134305 661 ntTSL 5 BASIC13.49□□□□□ -0.25
Hoxc8P09025 Tmem74bos-201ENSMUST00000137422 390 ntTSL 3 BASIC13.49□□□□□ -0.25
Hoxc8P09025 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC13.49□□□□□ -0.25
Hoxc8P09025 H2-Q3-201ENSMUST00000172583 608 ntBASIC13.49□□□□□ -0.25
Hoxc8P09025 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC13.49□□□□□ -0.25
Hoxc8P09025 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.49□□□□□ -0.25
Hoxc8P09025 Gm18038-201ENSMUST00000197900 485 ntBASIC13.49□□□□□ -0.25
Hoxc8P09025 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.1 ms