Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Hdac5-202ENSMUST00000107150 3759 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 Cacna1g-205ENSMUST00000107786 7984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 Bckdhb-205ENSMUST00000190166 1398 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.1□□□□□ -0.47
ApoeP08226 Bicra-201ENSMUST00000094821 5360 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ApoeP08226 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12.1□□□□□ -0.47
ApoeP08226 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC12.1□□□□□ -0.47
ApoeP08226 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ApoeP08226 Gm7063-201ENSMUST00000186840 981 ntBASIC12.1□□□□□ -0.47
ApoeP08226 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
ApoeP08226 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC12.1□□□□□ -0.47
ApoeP08226 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC12.1□□□□□ -0.47
ApoeP08226 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
ApoeP08226 Speg-201ENSMUST00000087122 10801 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 Ankzf1-208ENSMUST00000152233 2739 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 Fbn1-202ENSMUST00000103234 11971 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
ApoeP08226 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.1□□□□□ -0.47
ApoeP08226 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 Bmp3-201ENSMUST00000031278 6548 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 Ppp1r10-202ENSMUST00000087211 4255 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ApoeP08226 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
ApoeP08226 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
ApoeP08226 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Ormdl1-201ENSMUST00000027266 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.09□□□□□ -0.47
ApoeP08226 Kdm1b-201ENSMUST00000037025 4987 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Ppara-203ENSMUST00000109423 2519 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Otop1-202ENSMUST00000114099 3141 ntAPPRIS P5 TSL 5 BASIC12.09□□□□□ -0.47
ApoeP08226 Aqp6-201ENSMUST00000023754 2060 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Pcnt-202ENSMUST00000217838 9341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Abca3-201ENSMUST00000039013 6476 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 C230014O12Rik-201ENSMUST00000134921 2668 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC12.09□□□□□ -0.47
ApoeP08226 Gm11725-201ENSMUST00000125607 1850 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Cercam-201ENSMUST00000047521 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.09□□□□□ -0.47
ApoeP08226 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC12.09□□□□□ -0.47
ApoeP08226 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC12.09□□□□□ -0.47
ApoeP08226 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC12.09□□□□□ -0.47
ApoeP08226 Panct2-202ENSMUST00000188631 625 ntTSL 3 BASIC12.09□□□□□ -0.47
ApoeP08226 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC12.09□□□□□ -0.47
ApoeP08226 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.09□□□□□ -0.47
ApoeP08226 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC12.09□□□□□ -0.47
ApoeP08226 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC12.09□□□□□ -0.47
ApoeP08226 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 H2-K1-202ENSMUST00000087189 579 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Gm815-201ENSMUST00000099536 610 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Dysf-210ENSMUST00000153860 6525 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
ApoeP08226 Gm42893-201ENSMUST00000198035 1502 ntTSL 3 BASIC12.09□□□□□ -0.47
ApoeP08226 Gm1995-201ENSMUST00000220838 2602 ntBASIC12.09□□□□□ -0.47
ApoeP08226 Mgll-207ENSMUST00000163271 3991 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Msi2-203ENSMUST00000107909 6436 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Usp2-201ENSMUST00000034508 3867 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Timd2-201ENSMUST00000055102 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Gpr26-201ENSMUST00000045840 11571 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Tns2-202ENSMUST00000169627 4707 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Thap6-204ENSMUST00000193925 1337 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC12.09□□□□□ -0.47
ApoeP08226 Prom2-201ENSMUST00000028855 4796 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
ApoeP08226 Pak6-202ENSMUST00000110853 3677 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Cyp4f40-201ENSMUST00000165061 1858 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
ApoeP08226 Zcchc18-202ENSMUST00000101227 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Ebf3-203ENSMUST00000168203 3724 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Lig1-201ENSMUST00000098814 3091 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ApoeP08226 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.08□□□□□ -0.48
ApoeP08226 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Zfp108-201ENSMUST00000072713 1929 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
ApoeP08226 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
ApoeP08226 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
ApoeP08226 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 40.6 ms