Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC12.59□□□□□ -0.39
Hoxa4P06798 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxa4P06798 Tuba1a-201ENSMUST00000097014 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Hoxa4P06798 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC12.58□□□□□ -0.39
Hoxa4P06798 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.58□□□□□ -0.39
Hoxa4P06798 Usp16-201ENSMUST00000026710 3205 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hoxa4P06798 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.58□□□□□ -0.39
Hoxa4P06798 Rasgef1a-202ENSMUST00000203482 2227 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hoxa4P06798 Ugt1a2-201ENSMUST00000049289 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Hoxa4P06798 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa4P06798 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa4P06798 Hs3st1-202ENSMUST00000117944 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa4P06798 Zkscan3-207ENSMUST00000223831 2101 ntBASIC12.58□□□□□ -0.4
Hoxa4P06798 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Hoxa4P06798 Tfb2m-201ENSMUST00000027769 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa4P06798 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa4P06798 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC12.58□□□□□ -0.4
Hoxa4P06798 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa4P06798 1110018N20Rik-202ENSMUST00000147446 1162 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa4P06798 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa4P06798 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa4P06798 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC12.58□□□□□ -0.4
Hoxa4P06798 Gm18935-201ENSMUST00000212692 664 ntBASIC12.58□□□□□ -0.4
Hoxa4P06798 Timm9-203ENSMUST00000220482 859 ntAPPRIS P1 TSL 3 BASIC12.58□□□□□ -0.4
Hoxa4P06798 Retreg1-206ENSMUST00000228306 1430 ntBASIC12.58□□□□□ -0.4
Hoxa4P06798 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa4P06798 Mrps21-201ENSMUST00000067298 488 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa4P06798 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC12.58□□□□□ -0.4
Hoxa4P06798 E230020A03Rik-201ENSMUST00000194646 2386 ntBASIC12.58□□□□□ -0.4
Hoxa4P06798 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa4P06798 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa4P06798 Tmem56-204ENSMUST00000135818 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa4P06798 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Hoxa4P06798 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa4P06798 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa4P06798 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa4P06798 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa4P06798 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa4P06798 Adam32-201ENSMUST00000119720 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa4P06798 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.57□□□□□ -0.4
Hoxa4P06798 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa4P06798 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa4P06798 Leprot-202ENSMUST00000106927 1754 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa4P06798 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC12.57□□□□□ -0.4
Hoxa4P06798 1700066O22Rik-203ENSMUST00000150994 961 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa4P06798 Gm35082-201ENSMUST00000207308 338 ntTSL 3 BASIC12.57□□□□□ -0.4
Hoxa4P06798 Gm29154-230ENSMUST00000215044 1165 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxa4P06798 AC112680.3-201ENSMUST00000215297 488 ntTSL 3 BASIC12.57□□□□□ -0.4
Hoxa4P06798 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.57□□□□□ -0.4
Hoxa4P06798 Morn2-202ENSMUST00000227729 656 ntBASIC12.57□□□□□ -0.4
Hoxa4P06798 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa4P06798 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa4P06798 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa4P06798 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa4P06798 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa4P06798 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa4P06798 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Hoxa4P06798 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa4P06798 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC12.57□□□□□ -0.4
Hoxa4P06798 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa4P06798 Podn-202ENSMUST00000106708 2947 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa4P06798 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Hoxa4P06798 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC12.57□□□□□ -0.4
Hoxa4P06798 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Gnb1l-211ENSMUST00000167778 3569 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Gm42853-201ENSMUST00000201273 1387 ntBASIC12.56□□□□□ -0.4
Hoxa4P06798 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.56□□□□□ -0.4
Hoxa4P06798 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Hoxa4P06798 Rpn1-201ENSMUST00000032143 3633 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Tsc2-217ENSMUST00000227745 5598 ntAPPRIS ALT2 BASIC12.56□□□□□ -0.4
Hoxa4P06798 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Hoxa4P06798 Gm42863-201ENSMUST00000197875 2958 ntBASIC12.56□□□□□ -0.4
Hoxa4P06798 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.56□□□□□ -0.4
Hoxa4P06798 Olfm2-201ENSMUST00000034692 1836 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.56□□□□□ -0.4
Hoxa4P06798 Gm4986-201ENSMUST00000119731 549 ntBASIC12.56□□□□□ -0.4
Hoxa4P06798 Gm13394-201ENSMUST00000121658 1000 ntBASIC12.56□□□□□ -0.4
Hoxa4P06798 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC12.56□□□□□ -0.4
Hoxa4P06798 Serf1-203ENSMUST00000132053 516 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.56□□□□□ -0.4
Hoxa4P06798 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Gm26035-201ENSMUST00000083065 308 ntBASIC12.56□□□□□ -0.4
Hoxa4P06798 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Necap1-201ENSMUST00000032477 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Gm26588-202ENSMUST00000181355 2538 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Gm4735-201ENSMUST00000138679 1302 ntBASIC12.56□□□□□ -0.4
Hoxa4P06798 Gm5855-201ENSMUST00000200240 1305 ntBASIC12.56□□□□□ -0.4
Hoxa4P06798 Gm4366-201ENSMUST00000201488 1342 ntBASIC12.56□□□□□ -0.4
Hoxa4P06798 Odf2-201ENSMUST00000028128 2376 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Hoxa4P06798 Slc30a3-206ENSMUST00000202740 1989 ntTSL 5 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms