Protein–RNA interactions for Protein: P01852

T-cell receptor beta-1 chain C region, mousemouse

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P01852 1110032A03Rik-201ENSMUST00000042468 2082 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.54
P01852 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Ncor2-204ENSMUST00000111394 7452 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Gm37269-201ENSMUST00000193906 1891 ntBASIC11.7□□□□□ -0.54
P01852 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.7□□□□□ -0.54
P01852 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Eif4enif1-213ENSMUST00000179770 3676 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC11.7□□□□□ -0.54
P01852 Nab1-204ENSMUST00000170269 1371 ntTSL 5 BASIC11.7□□□□□ -0.54
P01852 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
P01852 Fibin-201ENSMUST00000099626 2267 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
P01852 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
P01852 AC122314.1-201ENSMUST00000223056 2239 ntBASIC11.7□□□□□ -0.54
P01852 Wwox-203ENSMUST00000109108 1771 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Traf6-201ENSMUST00000004949 6169 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Sh3bp2-202ENSMUST00000101316 3031 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Pole2-201ENSMUST00000021359 1706 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC11.7□□□□□ -0.54
P01852 Gm8062-201ENSMUST00000139696 444 ntBASIC11.7□□□□□ -0.54
P01852 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Snhg9-201ENSMUST00000161706 183 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 1700015O11Rik-201ENSMUST00000180964 678 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Gm28380-201ENSMUST00000188800 385 ntTSL 5 BASIC11.7□□□□□ -0.54
P01852 Gm43868-201ENSMUST00000205187 2114 ntBASIC11.7□□□□□ -0.54
P01852 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Olfr54-201ENSMUST00000072152 942 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
P01852 Olfr1375-201ENSMUST00000073543 942 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
P01852 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Gm9279-201ENSMUST00000223175 1606 ntBASIC11.7□□□□□ -0.54
P01852 Mettl17-201ENSMUST00000047899 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.7□□□□□ -0.54
P01852 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Paupar-201ENSMUST00000194826 3482 ntBASIC11.7□□□□□ -0.54
P01852 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Afap1l1-201ENSMUST00000120472 3444 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Gm26678-201ENSMUST00000181057 3025 ntTSL 5 BASIC11.7□□□□□ -0.54
P01852 Dpp9-201ENSMUST00000038794 3374 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 A530016L24Rik-201ENSMUST00000057465 2636 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Gm8706-201ENSMUST00000197372 1491 ntBASIC11.7□□□□□ -0.54
P01852 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Slc31a2-201ENSMUST00000084530 1820 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
P01852 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Corin-201ENSMUST00000005352 4862 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Wnt7b-202ENSMUST00000109424 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC11.69□□□□□ -0.54
P01852 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC11.69□□□□□ -0.54
P01852 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.69□□□□□ -0.54
P01852 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC11.69□□□□□ -0.54
P01852 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Gm17208-201ENSMUST00000168388 535 ntBASIC11.69□□□□□ -0.54
P01852 Gm25927-201ENSMUST00000175058 117 ntBASIC11.69□□□□□ -0.54
P01852 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC11.69□□□□□ -0.54
P01852 Ube2f-210ENSMUST00000191368 1110 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 AC159263.1-201ENSMUST00000220746 482 ntTSL 5 BASIC11.69□□□□□ -0.54
P01852 Gm4935-201ENSMUST00000221316 1198 ntBASIC11.69□□□□□ -0.54
P01852 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Olfr1423-201ENSMUST00000087831 933 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
P01852 Rbm47-204ENSMUST00000113726 4703 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Atp8a1-201ENSMUST00000037380 8178 ntAPPRIS P4 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Gm38385-201ENSMUST00000194454 2351 ntBASIC11.69□□□□□ -0.54
P01852 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Rnf17-202ENSMUST00000223627 2077 ntBASIC11.69□□□□□ -0.54
P01852 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC11.69□□□□□ -0.54
P01852 Gm15897-201ENSMUST00000117770 1486 ntBASIC11.69□□□□□ -0.54
P01852 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
P01852 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Atp6v1b1-201ENSMUST00000006431 1999 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Olfr763-201ENSMUST00000077460 2523 ntAPPRIS P1 BASIC11.68□□□□□ -0.54
P01852 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 4930423D22Rik-201ENSMUST00000221909 1674 ntBASIC11.68□□□□□ -0.54
P01852 Lgals12-202ENSMUST00000099729 2757 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
P01852 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC11.68□□□□□ -0.54
P01852 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.68□□□□□ -0.54
P01852 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
P01852 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 48.1 ms