Protein–RNA interactions for Protein: O89116

Vti1a, Vesicle transport through interaction with t-SNAREs homolog 1A, mousemouse

Predictions only

Length 217 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1aO89116 Upk3bl-202ENSMUST00000111137 1119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Ufc1-202ENSMUST00000111302 914 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Cryba4-203ENSMUST00000112385 808 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC13.81□□□□□ -0.2
Vti1aO89116 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.81□□□□□ -0.2
Vti1aO89116 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Gm8738-201ENSMUST00000172606 329 ntBASIC13.81□□□□□ -0.2
Vti1aO89116 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.81□□□□□ -0.2
Vti1aO89116 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Gm28638-201ENSMUST00000188152 288 ntTSL 5 BASIC13.81□□□□□ -0.2
Vti1aO89116 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC13.81□□□□□ -0.2
Vti1aO89116 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Gm9947-201ENSMUST00000067599 2920 ntBASIC13.81□□□□□ -0.2
Vti1aO89116 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Vti1aO89116 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Vti1aO89116 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Cops7b-202ENSMUST00000121534 5383 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Vti1aO89116 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Vti1aO89116 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Vti1aO89116 Ascc1-202ENSMUST00000164083 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1aO89116 Gm20605-201ENSMUST00000177545 4464 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
Vti1aO89116 Hdgfl2-212ENSMUST00000226053 2270 ntAPPRIS P2 BASIC13.8□□□□□ -0.2
Vti1aO89116 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1aO89116 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.8□□□□□ -0.2
Vti1aO89116 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1aO89116 Gm22323-201ENSMUST00000103832 109 ntBASIC13.8□□□□□ -0.2
Vti1aO89116 Rps19-203ENSMUST00000108430 774 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1aO89116 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1aO89116 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC13.8□□□□□ -0.2
Vti1aO89116 P2rx4-204ENSMUST00000139631 1030 ntTSL 5 BASIC13.8□□□□□ -0.2
Vti1aO89116 1700030C14Rik-201ENSMUST00000139912 756 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1aO89116 P2rx4-206ENSMUST00000142664 1111 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1aO89116 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1aO89116 Mymx-203ENSMUST00000178858 804 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1aO89116 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1aO89116 Gm45022-201ENSMUST00000208332 545 ntTSL 5 BASIC13.8□□□□□ -0.2
Vti1aO89116 Morn2-202ENSMUST00000227729 656 ntBASIC13.8□□□□□ -0.2
Vti1aO89116 CT025533.2-201ENSMUST00000228715 1248 ntBASIC13.8□□□□□ -0.2
Vti1aO89116 Ctrb1-201ENSMUST00000034435 878 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1aO89116 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1aO89116 Dysf-216ENSMUST00000204987 6474 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Vti1aO89116 Pced1b-201ENSMUST00000059433 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1aO89116 Ssr1-203ENSMUST00000225246 1825 ntBASIC13.8□□□□□ -0.2
Vti1aO89116 Akr1b3-201ENSMUST00000102980 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1aO89116 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1aO89116 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1aO89116 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
Vti1aO89116 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Vti1aO89116 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1aO89116 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Vti1aO89116 Gm2237-202ENSMUST00000170694 2090 ntAPPRIS P5 TSL 5 BASIC13.79□□□□□ -0.2
Vti1aO89116 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.79□□□□□ -0.2
Vti1aO89116 Stard8-201ENSMUST00000036606 4963 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Vti1aO89116 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC13.79□□□□□ -0.2
Vti1aO89116 Gm1661-203ENSMUST00000165128 1837 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Vti1aO89116 AC121805.2-201ENSMUST00000218808 2538 ntBASIC13.79□□□□□ -0.2
Vti1aO89116 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Nsg2-203ENSMUST00000109409 641 ntTSL 2 BASIC13.79□□□□□ -0.2
Vti1aO89116 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Gm6161-201ENSMUST00000121942 1102 ntBASIC13.79□□□□□ -0.2
Vti1aO89116 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Vti1aO89116 Gm6254-201ENSMUST00000168178 1072 ntBASIC13.79□□□□□ -0.2
Vti1aO89116 Gm6153-201ENSMUST00000172004 1058 ntBASIC13.79□□□□□ -0.2
Vti1aO89116 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Vti1aO89116 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Gm5641-202ENSMUST00000198699 1080 ntBASIC13.79□□□□□ -0.2
Vti1aO89116 Mettl6-204ENSMUST00000227595 1027 ntBASIC13.79□□□□□ -0.2
Vti1aO89116 Fn3k-201ENSMUST00000026175 1047 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Krtap19-9a-201ENSMUST00000062005 168 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Vti1aO89116 Zdhhc12-201ENSMUST00000081838 1187 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Vti1aO89116 Tceanc2-202ENSMUST00000057043 6431 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Otx2-209ENSMUST00000226501 2592 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Vti1aO89116 Siglecg-201ENSMUST00000005592 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Hsd17b6-201ENSMUST00000026462 1392 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Vti1aO89116 5930412G12Rik-203ENSMUST00000134673 2087 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 Gm10176-201ENSMUST00000159707 2264 ntBASIC13.79□□□□□ -0.2
Vti1aO89116 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Vti1aO89116 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms