Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Cd300ld2-202ENSMUST00000106578 918 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Ubr1O70481 Skap1-206ENSMUST00000107663 742 ntTSL 3 BASIC16.26■□□□□ 0.19
Ubr1O70481 Gm12579-201ENSMUST00000118040 783 ntBASIC16.26■□□□□ 0.19
Ubr1O70481 Ssty2-201ENSMUST00000179136 684 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
Ubr1O70481 Ssty2-202ENSMUST00000190565 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubr1O70481 Gm37246-201ENSMUST00000192665 835 ntBASIC16.26■□□□□ 0.19
Ubr1O70481 Gm38228-201ENSMUST00000193169 1293 ntBASIC16.26■□□□□ 0.19
Ubr1O70481 BC026585-203ENSMUST00000193791 778 ntTSL 2 BASIC16.26■□□□□ 0.19
Ubr1O70481 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Ubr1O70481 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr1O70481 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr1O70481 Gm36855-203ENSMUST00000216660 1406 ntTSL 5 BASIC16.25■□□□□ 0.19
Ubr1O70481 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr1O70481 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr1O70481 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr1O70481 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr1O70481 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr1O70481 Adcyap1r1-203ENSMUST00000165786 1745 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ubr1O70481 Nrf1-219ENSMUST00000167972 1541 ntTSL 5 BASIC16.25■□□□□ 0.19
Ubr1O70481 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr1O70481 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr1O70481 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC16.25■□□□□ 0.19
Ubr1O70481 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr1O70481 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
Ubr1O70481 B430119L08Rik-201ENSMUST00000130054 1994 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr1O70481 Ndel1-202ENSMUST00000101017 1646 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr1O70481 Gngt2-205ENSMUST00000107711 563 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
Ubr1O70481 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC16.25■□□□□ 0.19
Ubr1O70481 Gm23085-201ENSMUST00000157849 293 ntBASIC16.25■□□□□ 0.19
Ubr1O70481 Gm10774-201ENSMUST00000188689 204 ntBASIC16.25■□□□□ 0.19
Ubr1O70481 Gm45219-201ENSMUST00000205602 465 ntBASIC16.25■□□□□ 0.19
Ubr1O70481 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC16.25■□□□□ 0.19
Ubr1O70481 Nfkb2-201ENSMUST00000073116 3054 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr1O70481 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
Ubr1O70481 Hnrnpa2b1-203ENSMUST00000114459 1728 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
Ubr1O70481 Gjc1-202ENSMUST00000092567 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr1O70481 Mff-209ENSMUST00000160972 1358 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr1O70481 Ccr4-202ENSMUST00000215425 1382 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Ubr1O70481 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr1O70481 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr1O70481 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
Ubr1O70481 Tubb4b-ps2-201ENSMUST00000187481 1337 ntBASIC16.24■□□□□ 0.19
Ubr1O70481 Pkib-203ENSMUST00000095668 3311 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr1O70481 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr1O70481 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr1O70481 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr1O70481 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
Ubr1O70481 Gm13822-201ENSMUST00000127563 346 ntTSL 3 BASIC16.24■□□□□ 0.19
Ubr1O70481 Gm14235-201ENSMUST00000142445 366 ntTSL 3 BASIC16.24■□□□□ 0.19
Ubr1O70481 1700121N20Rik-201ENSMUST00000167922 1027 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr1O70481 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr1O70481 Gm43184-201ENSMUST00000197247 542 ntBASIC16.24■□□□□ 0.19
Ubr1O70481 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
Ubr1O70481 Nrg1-201ENSMUST00000073884 2452 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr1O70481 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr1O70481 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr1O70481 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr1O70481 Lhfpl1-201ENSMUST00000040084 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr1O70481 Scyl2-201ENSMUST00000092227 3566 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr1O70481 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr1O70481 Gpd1l-202ENSMUST00000129305 2543 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr1O70481 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
Ubr1O70481 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr1O70481 Elp4-202ENSMUST00000122965 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr1O70481 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr1O70481 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr1O70481 Sfxn3-202ENSMUST00000084493 2843 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr1O70481 Gm595-201ENSMUST00000114928 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
Ubr1O70481 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr1O70481 Odf2-208ENSMUST00000113763 2364 ntAPPRIS P3 TSL 5 BASIC16.23■□□□□ 0.19
Ubr1O70481 Avpr2-203ENSMUST00000114395 936 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr1O70481 Gm13809-201ENSMUST00000117921 597 ntBASIC16.23■□□□□ 0.19
Ubr1O70481 Gm11511-201ENSMUST00000118146 540 ntBASIC16.23■□□□□ 0.19
Ubr1O70481 Ldha-ps2-201ENSMUST00000118722 1057 ntBASIC16.23■□□□□ 0.19
Ubr1O70481 Ctdspl-202ENSMUST00000172464 798 ntAPPRIS ALT1 TSL 5 BASIC16.23■□□□□ 0.19
Ubr1O70481 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ubr1O70481 Mir7677-201ENSMUST00000184226 67 ntBASIC16.23■□□□□ 0.19
Ubr1O70481 1700030I03Rik-201ENSMUST00000192978 942 ntBASIC16.23■□□□□ 0.19
Ubr1O70481 A430050A11Rik-201ENSMUST00000195348 646 ntBASIC16.23■□□□□ 0.19
Ubr1O70481 Pex1-208ENSMUST00000195894 528 ntTSL 3 BASIC16.23■□□□□ 0.19
Ubr1O70481 Isg20-206ENSMUST00000205981 834 ntTSL 3 BASIC16.23■□□□□ 0.19
Ubr1O70481 Mt3-202ENSMUST00000211915 440 ntTSL 3 BASIC16.23■□□□□ 0.19
Ubr1O70481 CT010465.1-201ENSMUST00000222463 809 ntTSL 5 BASIC16.23■□□□□ 0.19
Ubr1O70481 Cd7-201ENSMUST00000026159 982 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr1O70481 Gm21411-201ENSMUST00000049821 750 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr1O70481 Rdh16f2-201ENSMUST00000092058 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr1O70481 AC126257.1-201ENSMUST00000213195 1536 ntBASIC16.23■□□□□ 0.19
Ubr1O70481 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.23■□□□□ 0.19
Ubr1O70481 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr1O70481 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr1O70481 Slc39a8-201ENSMUST00000029810 3203 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr1O70481 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr1O70481 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC16.23■□□□□ 0.19
Ubr1O70481 Slc5a11-207ENSMUST00000167299 2022 ntAPPRIS P1 TSL 5 BASIC16.23■□□□□ 0.19
Ubr1O70481 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr1O70481 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr1O70481 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr1O70481 Dync1li1-201ENSMUST00000047404 2601 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
Ubr1O70481 AC154262.2-202ENSMUST00000225158 1331 ntBASIC16.23■□□□□ 0.19
Ubr1O70481 Zfp369-203ENSMUST00000130799 1580 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms