Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Fchsd1-201ENSMUST00000043437 4270 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Adcyap1-201ENSMUST00000064775 2088 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Akt2-201ENSMUST00000051356 2923 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Matn3O35701 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Dgcr8-201ENSMUST00000009321 4320 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Kif13b-201ENSMUST00000100473 5603 ntAPPRIS P2 TSL 5 BASIC11.62□□□□□ -0.55
Matn3O35701 Chil1-201ENSMUST00000082060 1687 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Nudt8-201ENSMUST00000155405 3904 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Matn3O35701 Rbm4b-201ENSMUST00000036744 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Cabp5-201ENSMUST00000005791 1777 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Zfp641-201ENSMUST00000023722 4212 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Yars-201ENSMUST00000106054 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC11.62□□□□□ -0.55
Matn3O35701 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC11.62□□□□□ -0.55
Matn3O35701 Gm15458-201ENSMUST00000156950 709 ntTSL 5 BASIC11.62□□□□□ -0.55
Matn3O35701 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC11.62□□□□□ -0.55
Matn3O35701 Gm19184-201ENSMUST00000196798 928 ntBASIC11.62□□□□□ -0.55
Matn3O35701 AC090659.2-201ENSMUST00000225378 1186 ntBASIC11.62□□□□□ -0.55
Matn3O35701 Ttbk1-203ENSMUST00000225808 8926 ntAPPRIS ALT2 BASIC11.62□□□□□ -0.55
Matn3O35701 Hrasls5-201ENSMUST00000025929 1063 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Daxx-207ENSMUST00000174146 2424 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Gm43984-201ENSMUST00000204572 2864 ntBASIC11.62□□□□□ -0.55
Matn3O35701 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Matn3O35701 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Spata20-201ENSMUST00000041705 2627 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Gm45011-201ENSMUST00000207620 2297 ntBASIC11.62□□□□□ -0.55
Matn3O35701 Med12l-201ENSMUST00000029393 2295 ntTSL 5 BASIC11.62□□□□□ -0.55
Matn3O35701 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Setd3-202ENSMUST00000109879 2387 ntTSL 3 BASIC11.62□□□□□ -0.55
Matn3O35701 Zfp862-ps-201ENSMUST00000203457 3282 ntBASIC11.62□□□□□ -0.55
Matn3O35701 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Ptcd3-201ENSMUST00000082094 2581 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Clca2-203ENSMUST00000198993 2774 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Lrrfip1-204ENSMUST00000097650 2760 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 Smtn-202ENSMUST00000020721 3335 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Matn3O35701 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC11.61□□□□□ -0.55
Matn3O35701 Adgre5-208ENSMUST00000166939 2980 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Adgre5-201ENSMUST00000002964 2986 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Taf6-203ENSMUST00000110937 2093 ntTSL 5 BASIC11.61□□□□□ -0.55
Matn3O35701 Plekha7-203ENSMUST00000181998 5149 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Tmeff2-202ENSMUST00000114565 2718 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Lrrfip1-202ENSMUST00000068167 2849 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Matn3O35701 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Drd1-202ENSMUST00000221470 3576 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Arhgap39-201ENSMUST00000036176 4500 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Matn3O35701 6030458C11Rik-201ENSMUST00000057256 3966 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Vps33b-201ENSMUST00000032749 2574 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Grm7-202ENSMUST00000172951 4197 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Slc14a1-203ENSMUST00000160639 2047 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Matn3O35701 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC11.61□□□□□ -0.55
Matn3O35701 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC11.61□□□□□ -0.55
Matn3O35701 Rasgrp2-207ENSMUST00000113475 573 ntTSL 5 BASIC11.61□□□□□ -0.55
Matn3O35701 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Gm31816-201ENSMUST00000209388 1294 ntTSL 5 BASIC11.61□□□□□ -0.55
Matn3O35701 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC11.61□□□□□ -0.55
Matn3O35701 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC11.61□□□□□ -0.55
Matn3O35701 Arhgef33-209ENSMUST00000225223 714 ntBASIC11.61□□□□□ -0.55
Matn3O35701 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC11.61□□□□□ -0.55
Matn3O35701 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Tbcd-201ENSMUST00000103013 3906 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Matn3O35701 Xkr5-201ENSMUST00000055503 3176 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Gm13517-201ENSMUST00000120782 1495 ntBASIC11.61□□□□□ -0.55
Matn3O35701 Hmgcs2-202ENSMUST00000120541 2524 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Wapl-202ENSMUST00000090027 4185 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Matn3O35701 Hk3-203ENSMUST00000126234 3032 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Srr-203ENSMUST00000108448 3239 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Matn3O35701 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Matn3O35701 Mylip-202ENSMUST00000222178 1954 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Nek4-201ENSMUST00000050171 2793 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Matn3O35701 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Matn3O35701 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Matn3O35701 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Matn3O35701 4930428O21Rik-201ENSMUST00000198537 1740 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Matn3O35701 9330199G10Rik-202ENSMUST00000221607 1728 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Matn3O35701 Gm15541-201ENSMUST00000147449 2713 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Matn3O35701 Camta2-205ENSMUST00000119120 4460 ntAPPRIS ALT2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms