Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Gm21982-201ENSMUST00000146232 3821 ntTSL 2 BASIC14.95□□□□□ -0.02
Tcof1O08784 Tnpo2-202ENSMUST00000166592 4884 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
Tcof1O08784 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tcof1O08784 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Tcof1O08784 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Tcof1O08784 Daam2-202ENSMUST00000224595 1926 ntBASIC14.95□□□□□ -0.02
Tcof1O08784 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tcof1O08784 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC14.94□□□□□ -0.02
Tcof1O08784 Gm13297-201ENSMUST00000120205 934 ntBASIC14.94□□□□□ -0.02
Tcof1O08784 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC14.94□□□□□ -0.02
Tcof1O08784 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC14.94□□□□□ -0.02
Tcof1O08784 Usp46os2-201ENSMUST00000152787 831 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tcof1O08784 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Tcof1O08784 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tcof1O08784 Mospd4-201ENSMUST00000180618 576 ntBASIC14.94□□□□□ -0.02
Tcof1O08784 Gm6652-201ENSMUST00000186414 1070 ntBASIC14.94□□□□□ -0.02
Tcof1O08784 AC132384.14-201ENSMUST00000219346 1147 ntBASIC14.94□□□□□ -0.02
Tcof1O08784 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.94□□□□□ -0.02
Tcof1O08784 AC138604.1-201ENSMUST00000226969 739 ntBASIC14.94□□□□□ -0.02
Tcof1O08784 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tcof1O08784 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.94□□□□□ -0.02
Tcof1O08784 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tcof1O08784 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tcof1O08784 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Tcof1O08784 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Tcof1O08784 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tcof1O08784 Tcf12-202ENSMUST00000183404 6299 ntAPPRIS P3 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tcof1O08784 Gm44579-201ENSMUST00000142443 2064 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Tcof1O08784 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tcof1O08784 Fancc-218ENSMUST00000220684 2006 ntTSL 5 BASIC14.94□□□□□ -0.02
Tcof1O08784 Mlh1-201ENSMUST00000035079 2754 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tcof1O08784 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tcof1O08784 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tcof1O08784 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tcof1O08784 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tcof1O08784 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
Tcof1O08784 Tmem80-204ENSMUST00000128906 1387 ntTSL 2 BASIC14.94□□□□□ -0.02
Tcof1O08784 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tcof1O08784 Tpm3-rs7-201ENSMUST00000072359 2147 ntAPPRIS P1 BASIC14.94□□□□□ -0.02
Tcof1O08784 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Tcof1O08784 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tcof1O08784 Gm3287-205ENSMUST00000228893 1332 ntBASIC14.94□□□□□ -0.02
Tcof1O08784 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Tcof1O08784 Nek3-201ENSMUST00000033865 2021 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Gm14921-201ENSMUST00000118643 908 ntBASIC14.93□□□□□ -0.02
Tcof1O08784 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Pagr1b-201ENSMUST00000172958 693 ntAPPRIS P1 TSL 3 BASIC14.93□□□□□ -0.02
Tcof1O08784 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.93□□□□□ -0.02
Tcof1O08784 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
Tcof1O08784 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC14.93□□□□□ -0.02
Tcof1O08784 Kdelr1-203ENSMUST00000211234 832 ntTSL 2 BASIC14.93□□□□□ -0.02
Tcof1O08784 Aprt-203ENSMUST00000211823 590 ntTSL 3 BASIC14.93□□□□□ -0.02
Tcof1O08784 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC14.93□□□□□ -0.02
Tcof1O08784 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC14.93□□□□□ -0.02
Tcof1O08784 Saa3-201ENSMUST00000006956 555 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Adtrp-202ENSMUST00000121404 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC14.93□□□□□ -0.02
Tcof1O08784 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.93□□□□□ -0.02
Tcof1O08784 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Gm20633-201ENSMUST00000176742 2831 ntBASIC14.93□□□□□ -0.02
Tcof1O08784 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Hrg-201ENSMUST00000023590 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Mapk8ip3-206ENSMUST00000120035 4125 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Tcof1O08784 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Tcof1O08784 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC14.93□□□□□ -0.02
Tcof1O08784 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Tcof1O08784 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tcof1O08784 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Tcof1O08784 Blvrb-202ENSMUST00000108357 782 ntTSL 2 BASIC14.92□□□□□ -0.02
Tcof1O08784 Gm12241-201ENSMUST00000118330 726 ntBASIC14.92□□□□□ -0.02
Tcof1O08784 Gm4986-201ENSMUST00000119731 549 ntBASIC14.92□□□□□ -0.02
Tcof1O08784 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Tcof1O08784 Eif4e1b-204ENSMUST00000132005 706 ntTSL 2 BASIC14.92□□□□□ -0.02
Tcof1O08784 Gm26083-201ENSMUST00000157904 193 ntBASIC14.92□□□□□ -0.02
Tcof1O08784 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Tcof1O08784 Gm7895-201ENSMUST00000187459 1173 ntBASIC14.92□□□□□ -0.02
Tcof1O08784 Gm6621-201ENSMUST00000193251 772 ntBASIC14.92□□□□□ -0.02
Tcof1O08784 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC14.92□□□□□ -0.02
Tcof1O08784 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Tcof1O08784 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Tcof1O08784 Gm45865-201ENSMUST00000211815 945 ntBASIC14.92□□□□□ -0.02
Tcof1O08784 Tmem205-203ENSMUST00000213698 705 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Tcof1O08784 AC159747.1-201ENSMUST00000219903 265 ntBASIC14.92□□□□□ -0.02
Tcof1O08784 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC14.92□□□□□ -0.02
Tcof1O08784 Gm43463-201ENSMUST00000195967 1803 ntBASIC14.92□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 29.7 ms