Protein–RNA interactions for Protein: G5E8P0

Tubgcp6, Gamma-tubulin complex component 6, mousemouse

Predictions only

Length 1,769 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tubgcp6G5E8P0 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp6G5E8P0 Gm43045-201ENSMUST00000198725 2095 ntBASIC17.36■□□□□ 0.37
Tubgcp6G5E8P0 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp6G5E8P0 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp6G5E8P0 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC17.36■□□□□ 0.37
Tubgcp6G5E8P0 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Tubgcp6G5E8P0 Sln-201ENSMUST00000048485 1318 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Tubgcp6G5E8P0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 Tcf7l2-205ENSMUST00000111651 1127 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 Gm15856-201ENSMUST00000124853 1162 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 Gm16312-201ENSMUST00000156285 362 ntTSL 3 BASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 Gm23119-201ENSMUST00000158610 140 ntBASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 Gm37458-201ENSMUST00000194055 410 ntBASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 Mt1-202ENSMUST00000211807 1085 ntBASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 Gm3619-201ENSMUST00000219947 775 ntBASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 AC126799.1-201ENSMUST00000221976 246 ntBASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 Zfyve9-202ENSMUST00000106657 6459 ntAPPRIS P2 TSL 5 BASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 Gm9954-202ENSMUST00000198686 4725 ntBASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 Pfkfb3-213ENSMUST00000171188 2058 ntTSL 5 BASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 5033406O09Rik-201ENSMUST00000221314 1662 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 Rubcn-204ENSMUST00000119810 3371 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 1700025F24Rik-201ENSMUST00000185238 894 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 Gm37695-201ENSMUST00000191765 530 ntTSL 5 BASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 1700012D14Rik-204ENSMUST00000210788 547 ntTSL 3 BASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 Cmbl-201ENSMUST00000070918 1155 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 Rpl15-201ENSMUST00000079419 883 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 Garem2-201ENSMUST00000058045 3865 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
Tubgcp6G5E8P0 Ccdc60-202ENSMUST00000086483 2168 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp6G5E8P0 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp6G5E8P0 Maml1-201ENSMUST00000059458 5528 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp6G5E8P0 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC17.34■□□□□ 0.37
Tubgcp6G5E8P0 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp6G5E8P0 Sh3glb2-202ENSMUST00000100215 1749 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp6G5E8P0 Pdp1-205ENSMUST00000108301 2635 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp6G5E8P0 Gm4726-201ENSMUST00000135604 736 ntBASIC17.34■□□□□ 0.37
Tubgcp6G5E8P0 Gm6019-201ENSMUST00000148369 736 ntBASIC17.34■□□□□ 0.37
Tubgcp6G5E8P0 Gm15978-201ENSMUST00000161043 738 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp6G5E8P0 Siglech-205ENSMUST00000165045 1062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp6G5E8P0 Gm44158-201ENSMUST00000203881 505 ntBASIC17.34■□□□□ 0.37
Tubgcp6G5E8P0 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Tubgcp6G5E8P0 Lgals4-207ENSMUST00000208971 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp6G5E8P0 AC154305.4-201ENSMUST00000224520 614 ntBASIC17.34■□□□□ 0.37
Tubgcp6G5E8P0 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp6G5E8P0 Sstr5-202ENSMUST00000165183 2581 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp6G5E8P0 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp6G5E8P0 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp6G5E8P0 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp6G5E8P0 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
Tubgcp6G5E8P0 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
Tubgcp6G5E8P0 Obsl1-201ENSMUST00000113565 3379 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
Tubgcp6G5E8P0 Fam110a-203ENSMUST00000109864 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tubgcp6G5E8P0 Gm14314-201ENSMUST00000118225 1015 ntBASIC17.33■□□□□ 0.37
Tubgcp6G5E8P0 Spaca6-209ENSMUST00000172097 1073 ntAPPRIS P1 TSL 5 BASIC17.33■□□□□ 0.37
Tubgcp6G5E8P0 Rpain-201ENSMUST00000018593 1100 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tubgcp6G5E8P0 Gm42518-201ENSMUST00000196277 938 ntBASIC17.33■□□□□ 0.37
Tubgcp6G5E8P0 Dnajb6-212ENSMUST00000198694 505 ntTSL 3 BASIC17.33■□□□□ 0.37
Tubgcp6G5E8P0 Gm34821-201ENSMUST00000208399 1031 ntTSL 5 BASIC17.33■□□□□ 0.37
Tubgcp6G5E8P0 Gm4157-201ENSMUST00000211647 679 ntBASIC17.33■□□□□ 0.37
Tubgcp6G5E8P0 Tbca-201ENSMUST00000046644 559 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tubgcp6G5E8P0 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC17.33■□□□□ 0.37
Tubgcp6G5E8P0 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tubgcp6G5E8P0 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Tubgcp6G5E8P0 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
Tubgcp6G5E8P0 Kars-201ENSMUST00000034426 2008 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp6G5E8P0 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
Tubgcp6G5E8P0 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp6G5E8P0 Anxa11-201ENSMUST00000022416 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp6G5E8P0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp6G5E8P0 Dpp6-201ENSMUST00000071500 3826 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp6G5E8P0 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp6G5E8P0 Cbs-203ENSMUST00000118504 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp6G5E8P0 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp6G5E8P0 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp6G5E8P0 Prkcsh-201ENSMUST00000003493 2012 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp6G5E8P0 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp6G5E8P0 Lysmd4-208ENSMUST00000208698 551 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
Tubgcp6G5E8P0 Gm19640-201ENSMUST00000214849 464 ntBASIC17.33■□□□□ 0.36
Tubgcp6G5E8P0 Scg5-201ENSMUST00000024005 1208 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp6G5E8P0 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Tubgcp6G5E8P0 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Mfsd13b-205ENSMUST00000216241 1761 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Cd72-205ENSMUST00000107926 1419 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Slc10a1-203ENSMUST00000218342 1411 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Cd72-203ENSMUST00000098105 1420 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Dgkg-201ENSMUST00000023578 2725 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Ifna2-201ENSMUST00000105147 1032 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Hmgn3-201ENSMUST00000161796 862 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Gm15996-201ENSMUST00000161925 762 ntTSL 5 BASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Mir7677-201ENSMUST00000184226 67 ntBASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Gm44329-201ENSMUST00000197469 112 ntBASIC17.32■□□□□ 0.36
Tubgcp6G5E8P0 Mrnip-201ENSMUST00000020647 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 47.8 ms