Protein–RNA interactions for Protein: F8VQB8

Npcd, Neuronal pentraxin chromo domain, mousemouse

Predictions only

Length 469 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NpcdF8VQB8 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.36■□□□□ 0.05
NpcdF8VQB8 Gm8365-201ENSMUST00000197334 648 ntBASIC15.36■□□□□ 0.05
NpcdF8VQB8 9530020I12Rik-203ENSMUST00000219371 819 ntTSL 3 BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Prss39-201ENSMUST00000027299 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Snf8-201ENSMUST00000006217 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Wfdc21-201ENSMUST00000070832 434 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Gm4950-201ENSMUST00000091905 618 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Gm3287-205ENSMUST00000228893 1332 ntBASIC15.36■□□□□ 0.05
NpcdF8VQB8 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Ikzf4-201ENSMUST00000133342 5150 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Got1l1-201ENSMUST00000038174 1356 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
NpcdF8VQB8 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Gm43364-201ENSMUST00000196046 3274 ntBASIC15.35■□□□□ 0.05
NpcdF8VQB8 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Gm2155-201ENSMUST00000181581 1974 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Trpm2-201ENSMUST00000105399 731 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Gm13736-201ENSMUST00000119272 253 ntBASIC15.35■□□□□ 0.05
NpcdF8VQB8 Gm11675-201ENSMUST00000121873 832 ntBASIC15.35■□□□□ 0.05
NpcdF8VQB8 Gm16195-201ENSMUST00000130607 442 ntTSL 2 BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Gm12690-201ENSMUST00000132108 354 ntTSL 3 BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Gm17391-201ENSMUST00000171036 126 ntBASIC15.35■□□□□ 0.05
NpcdF8VQB8 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Gm27184-201ENSMUST00000185095 607 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Gm29615-201ENSMUST00000185371 697 ntBASIC15.35■□□□□ 0.05
NpcdF8VQB8 Gm28224-201ENSMUST00000186078 697 ntBASIC15.35■□□□□ 0.05
NpcdF8VQB8 Gm29001-201ENSMUST00000186177 697 ntBASIC15.35■□□□□ 0.05
NpcdF8VQB8 Gm28292-201ENSMUST00000186593 697 ntBASIC15.35■□□□□ 0.05
NpcdF8VQB8 Gm28101-201ENSMUST00000187608 697 ntBASIC15.35■□□□□ 0.05
NpcdF8VQB8 Gm29076-201ENSMUST00000187689 697 ntBASIC15.35■□□□□ 0.05
NpcdF8VQB8 Gm28302-201ENSMUST00000187931 697 ntBASIC15.35■□□□□ 0.05
NpcdF8VQB8 Gm28646-201ENSMUST00000188220 697 ntBASIC15.35■□□□□ 0.05
NpcdF8VQB8 Gm28205-201ENSMUST00000189177 697 ntBASIC15.35■□□□□ 0.05
NpcdF8VQB8 Gm29032-201ENSMUST00000189797 697 ntBASIC15.35■□□□□ 0.05
NpcdF8VQB8 Gm28695-201ENSMUST00000190300 697 ntBASIC15.35■□□□□ 0.05
NpcdF8VQB8 Gm37448-201ENSMUST00000192795 697 ntBASIC15.35■□□□□ 0.05
NpcdF8VQB8 Ighv8-10-201ENSMUST00000199579 358 ntBASIC15.35■□□□□ 0.05
NpcdF8VQB8 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Olfr707-202ENSMUST00000208759 1242 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Cct2-206ENSMUST00000219573 637 ntTSL 3 BASIC15.35■□□□□ 0.05
NpcdF8VQB8 AC099645.1-201ENSMUST00000226476 1105 ntBASIC15.35■□□□□ 0.05
NpcdF8VQB8 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Dync1i2-202ENSMUST00000100028 2097 ntTSL 5 BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 6230400D17Rik-201ENSMUST00000180987 1554 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
NpcdF8VQB8 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Cdkn2aip-201ENSMUST00000038738 3464 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Klf12-201ENSMUST00000097079 1856 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
NpcdF8VQB8 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NpcdF8VQB8 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC15.34■□□□□ 0.05
NpcdF8VQB8 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Rpsa-ps4-201ENSMUST00000121691 888 ntBASIC15.34■□□□□ 0.05
NpcdF8VQB8 Gm15972-201ENSMUST00000132571 418 ntTSL 2 BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Cox6c-203ENSMUST00000153512 738 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Gm25951-201ENSMUST00000175330 64 ntBASIC15.34■□□□□ 0.05
NpcdF8VQB8 Gm9358-201ENSMUST00000183067 927 ntBASIC15.34■□□□□ 0.05
NpcdF8VQB8 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NpcdF8VQB8 AC166992.1-201ENSMUST00000216356 565 ntBASIC15.34■□□□□ 0.05
NpcdF8VQB8 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC15.34■□□□□ 0.05
NpcdF8VQB8 AC166344.1-202ENSMUST00000224139 234 ntBASIC15.34■□□□□ 0.05
NpcdF8VQB8 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Ppie-201ENSMUST00000030404 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
NpcdF8VQB8 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
NpcdF8VQB8 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms