Protein–RNA interactions for Protein: F8VPY8

Colca2, COLCA2 homolog, mousemouse

Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Colca2F8VPY8 Prr13-201ENSMUST00000023810 1224 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Colca2F8VPY8 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Colca2F8VPY8 Platr7-201ENSMUST00000181466 1334 ntTSL 1 (best) BASIC12□□□□□ -0.49
Colca2F8VPY8 Gm9387-201ENSMUST00000098624 1320 ntBASIC12□□□□□ -0.49
Colca2F8VPY8 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Colca2F8VPY8 Mthfsd-210ENSMUST00000139782 1366 ntTSL 5 BASIC12□□□□□ -0.49
Colca2F8VPY8 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Colca2F8VPY8 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Colca2F8VPY8 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC12□□□□□ -0.49
Colca2F8VPY8 Gm37165-201ENSMUST00000193815 1463 ntTSL 1 (best) BASIC12□□□□□ -0.49
Colca2F8VPY8 Slc41a1-201ENSMUST00000086559 4697 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Colca2F8VPY8 Gm10785-201ENSMUST00000156242 1583 ntTSL 1 (best) BASIC12□□□□□ -0.49
Colca2F8VPY8 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Colca2F8VPY8 Sgce-209ENSMUST00000133306 1619 ntTSL 1 (best) BASIC12□□□□□ -0.49
Colca2F8VPY8 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC12□□□□□ -0.49
Colca2F8VPY8 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Colca2F8VPY8 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Colca2F8VPY8 Ksr1-207ENSMUST00000226282 5260 ntBASIC12□□□□□ -0.49
Colca2F8VPY8 Fnbp1-202ENSMUST00000075326 1761 ntTSL 5 BASIC12□□□□□ -0.49
Colca2F8VPY8 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Colca2F8VPY8 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Colca2F8VPY8 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Colca2F8VPY8 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12□□□□□ -0.49
Colca2F8VPY8 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Gprc5a-201ENSMUST00000050104 2083 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Lnx1-209ENSMUST00000153543 2208 ntTSL 5 BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Nacc2-201ENSMUST00000028300 6378 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Cdk2ap1-202ENSMUST00000111472 648 ntAPPRIS ALT1 TSL 5 BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Gm12857-201ENSMUST00000117678 592 ntBASIC11.99□□□□□ -0.49
Colca2F8VPY8 Gm15573-201ENSMUST00000119487 540 ntBASIC11.99□□□□□ -0.49
Colca2F8VPY8 Olfr269-ps1-201ENSMUST00000120783 302 ntBASIC11.99□□□□□ -0.49
Colca2F8VPY8 Gm8199-201ENSMUST00000121323 823 ntBASIC11.99□□□□□ -0.49
Colca2F8VPY8 Tsc22d1-206ENSMUST00000134109 801 ntTSL 2 BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Cd63-ps-202ENSMUST00000154992 717 ntBASIC11.99□□□□□ -0.49
Colca2F8VPY8 Gm23119-201ENSMUST00000158610 140 ntBASIC11.99□□□□□ -0.49
Colca2F8VPY8 Rn7s6-201ENSMUST00000175005 291 ntBASIC11.99□□□□□ -0.49
Colca2F8VPY8 Gm9022-201ENSMUST00000182482 992 ntBASIC11.99□□□□□ -0.49
Colca2F8VPY8 Gm28516-201ENSMUST00000190257 663 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Gm45909-201ENSMUST00000212413 1031 ntBASIC11.99□□□□□ -0.49
Colca2F8VPY8 AC153505.1-201ENSMUST00000218819 1071 ntBASIC11.99□□□□□ -0.49
Colca2F8VPY8 Cox6a2-201ENSMUST00000033049 680 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Krtap19-9b-201ENSMUST00000077715 461 ntAPPRIS P1 BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Snora73b-201ENSMUST00000083419 205 ntBASIC11.99□□□□□ -0.49
Colca2F8VPY8 Ifi27-205ENSMUST00000085065 977 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Klk1b16-201ENSMUST00000005933 1387 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Yaf2-201ENSMUST00000080299 1676 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 4930488B22Rik-201ENSMUST00000172500 1722 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Acad12-202ENSMUST00000111776 2269 ntTSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Lins1-202ENSMUST00000077967 2647 ntAPPRIS ALT2 TSL 2 BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Gm38391-201ENSMUST00000191720 4069 ntBASIC11.99□□□□□ -0.49
Colca2F8VPY8 Prickle1-201ENSMUST00000048982 4085 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Arap2-201ENSMUST00000076623 7306 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC11.99□□□□□ -0.49
Colca2F8VPY8 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Ttc3-202ENSMUST00000119131 3212 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Pja1-205ENSMUST00000167246 2666 ntAPPRIS P4 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Cxcr5-201ENSMUST00000062215 2614 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Ttc33-203ENSMUST00000118193 1671 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Dusp14-201ENSMUST00000018792 1571 ntAPPRIS P1 TSL 2 BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Wfdc8-201ENSMUST00000094351 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Rgs6-209ENSMUST00000186848 1472 ntTSL 5 BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Rnf113a2-201ENSMUST00000183146 1383 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Gm45342-201ENSMUST00000210903 1363 ntBASIC11.98□□□□□ -0.49
Colca2F8VPY8 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Tectb-202ENSMUST00000120936 1349 ntTSL 5 BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Ccdc42os-201ENSMUST00000148019 1335 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Ccl1-202ENSMUST00000108189 514 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Colca2F8VPY8 Gm11892-201ENSMUST00000117711 1202 ntBASIC11.98□□□□□ -0.49
Colca2F8VPY8 Immp2l-202ENSMUST00000132121 1147 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Colca2F8VPY8 2310057J18Rik-204ENSMUST00000152363 1043 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 60.2 ms