Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Gm8355-201ENSMUST00000177767 1941 ntBASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Sectm1a-204ENSMUST00000106120 1020 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Gm14921-201ENSMUST00000118643 908 ntBASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Gm12715-201ENSMUST00000121430 1128 ntBASIC12.61□□□□□ -0.39
Srp54bE9PXC0 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Gm2383-201ENSMUST00000181461 807 ntBASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Gm5597-201ENSMUST00000182353 1193 ntBASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 AC167013.1-201ENSMUST00000228592 202 ntBASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Trex2-201ENSMUST00000033738 1017 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Gng4-201ENSMUST00000021734 3179 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Fuca2-203ENSMUST00000121465 5741 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 AC122314.1-201ENSMUST00000223056 2239 ntBASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Rbpjl-201ENSMUST00000017151 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Gm8862-201ENSMUST00000198379 1346 ntBASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Tmem19-206ENSMUST00000218731 1346 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Gm3287-205ENSMUST00000228893 1332 ntBASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Srp54bE9PXC0 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Tulp2-201ENSMUST00000024233 1749 ntAPPRIS P5 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Gm8206-201ENSMUST00000164139 1956 ntTSL 5 BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Gm37737-201ENSMUST00000195013 1638 ntBASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Rsph3b-201ENSMUST00000024572 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 D630024D03Rik-201ENSMUST00000126265 720 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Gm14809-201ENSMUST00000152025 695 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Gm15395-201ENSMUST00000153724 702 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Nme9-202ENSMUST00000163199 1196 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Grp-203ENSMUST00000173985 952 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Gm33115-201ENSMUST00000220913 743 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Wsb2-202ENSMUST00000111959 1526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Tekt4-201ENSMUST00000025002 1532 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Gm30725-201ENSMUST00000195170 1419 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Gm1113-201ENSMUST00000183573 2434 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Gm11405-201ENSMUST00000118689 1556 ntBASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Ube3a-216ENSMUST00000202945 3889 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Grk6-203ENSMUST00000224118 1997 ntAPPRIS ALT2 BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Srp54bE9PXC0 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Gtf2f1-201ENSMUST00000002733 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Gm10782-202ENSMUST00000223775 1480 ntBASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Dnajb4-201ENSMUST00000029669 1497 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.59□□□□□ -0.39
Srp54bE9PXC0 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms