Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Col6a3E9PWQ3 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Col6a3E9PWQ3 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col6a3E9PWQ3 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
Col6a3E9PWQ3 Gm23272-201ENSMUST00000104053 129 ntBASIC12.4□□□□□ -0.43
Col6a3E9PWQ3 Gm13094-201ENSMUST00000117930 409 ntBASIC12.4□□□□□ -0.43
Col6a3E9PWQ3 Tnnc1-202ENSMUST00000169169 721 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col6a3E9PWQ3 1700017I07Rik-201ENSMUST00000184823 462 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
Col6a3E9PWQ3 Ighv4-2-201ENSMUST00000192975 362 ntBASIC12.4□□□□□ -0.43
Col6a3E9PWQ3 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col6a3E9PWQ3 Trim62-201ENSMUST00000035667 3752 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col6a3E9PWQ3 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col6a3E9PWQ3 Epc2-201ENSMUST00000092123 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
Col6a3E9PWQ3 H2-T22-202ENSMUST00000077960 1694 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Gm6161-201ENSMUST00000121942 1102 ntBASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Gm15886-201ENSMUST00000123155 1250 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Gm6153-201ENSMUST00000172004 1058 ntBASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Gm6946-201ENSMUST00000182237 987 ntBASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Gm5641-202ENSMUST00000198699 1080 ntBASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Gm30055-201ENSMUST00000203175 803 ntBASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 AC114645.1-201ENSMUST00000215831 187 ntBASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 CT571245.2-201ENSMUST00000218421 305 ntBASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Schip1-202ENSMUST00000169909 1517 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Sec24b-201ENSMUST00000001079 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Acad8-202ENSMUST00000120367 2885 ntAPPRIS ALT2 TSL 5 BASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Ppm1b-203ENSMUST00000112305 1591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Nsd3-208ENSMUST00000146919 3652 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Gm13117-201ENSMUST00000120894 691 ntBASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Gm8705-201ENSMUST00000180823 812 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Gm8343-201ENSMUST00000182705 994 ntBASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 A830092H15Rik-202ENSMUST00000195446 649 ntTSL 3 BASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 AC154305.4-201ENSMUST00000224520 614 ntBASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 3100002H09Rik-201ENSMUST00000053604 873 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Gm20721-201ENSMUST00000168292 1484 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Lmbr1l-202ENSMUST00000109127 2548 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 C130050O18Rik-202ENSMUST00000163940 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Mdm2-201ENSMUST00000020408 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Magea2-202ENSMUST00000112559 1302 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Col6a3E9PWQ3 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Fbln1-201ENSMUST00000057410 3659 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 2610016A17Rik-201ENSMUST00000185211 474 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Gm29543-201ENSMUST00000188138 967 ntBASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Nme6-214ENSMUST00000200468 865 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Gm7735-201ENSMUST00000089098 159 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Pttg1-203ENSMUST00000101340 700 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Map2k7-205ENSMUST00000110996 1188 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Crygf-202ENSMUST00000114027 594 ntTSL 2 BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Pttg1-205ENSMUST00000118368 696 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Gm12791-201ENSMUST00000120788 655 ntBASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Tctex1d1-205ENSMUST00000140654 891 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Gm36423-202ENSMUST00000222215 1298 ntTSL 5 BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Gm5449-201ENSMUST00000081132 357 ntBASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Gm12159-201ENSMUST00000143869 1447 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Rasa4-201ENSMUST00000042135 2914 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 1200007C13Rik-201ENSMUST00000143649 2455 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Cnnm1-201ENSMUST00000165311 5037 ntAPPRIS P2 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Wdr5-201ENSMUST00000113952 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Tcl1-202ENSMUST00000101071 1299 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 1700112K13Rik-201ENSMUST00000141892 701 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Gm11365-201ENSMUST00000144277 774 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 1700122E12Rik-202ENSMUST00000147538 479 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Tcl1-204ENSMUST00000176579 760 ntTSL 2 BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Gm26982-201ENSMUST00000182250 1151 ntBASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Gm6652-201ENSMUST00000186414 1070 ntBASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 AC165260.3-202ENSMUST00000224550 1031 ntBASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Olfr1350-201ENSMUST00000070985 927 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Hpgd-201ENSMUST00000034026 1683 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
Col6a3E9PWQ3 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Zfp91-201ENSMUST00000038627 5531 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Mrps36-203ENSMUST00000109333 701 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Col6a3E9PWQ3 Mir8093-201ENSMUST00000185043 137 ntBASIC12.37□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 39.2 ms