Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Dph7-201ENSMUST00000028351 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 5330439B14Rik-201ENSMUST00000194811 1392 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Brd3-203ENSMUST00000113941 5289 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Gpr45-203ENSMUST00000179766 3776 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Tagln2-202ENSMUST00000111230 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Gm24891-201ENSMUST00000104391 136 ntBASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Gm22711-201ENSMUST00000116890 133 ntBASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Mir1901-201ENSMUST00000122616 78 ntBASIC12.87□□□□□ -0.35
Col4a6B1AVK5 9430091E24Rik-201ENSMUST00000127301 1067 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Ager-207ENSMUST00000173992 1248 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Smlr1-201ENSMUST00000179685 669 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Gm35822-201ENSMUST00000204954 562 ntTSL 3 BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 AC099645.1-201ENSMUST00000226476 1105 ntBASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Hist2h4-201ENSMUST00000171473 1630 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Gimap3-202ENSMUST00000204036 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Ip6k2-201ENSMUST00000085018 1846 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Psap-204ENSMUST00000177779 2657 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Psap-205ENSMUST00000179238 2657 ntAPPRIS P3 TSL 5 BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Psap-201ENSMUST00000004316 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Brsk1-204ENSMUST00000205666 1398 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Ttc23l-201ENSMUST00000022857 1931 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Ccdc71l-201ENSMUST00000172332 4240 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Tsen2-201ENSMUST00000040234 2106 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Col4a6B1AVK5 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Cela3b-201ENSMUST00000102522 926 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Gm14247-201ENSMUST00000120950 237 ntBASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Ly6g6e-201ENSMUST00000013910 1142 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Gm9358-201ENSMUST00000183067 927 ntBASIC12.86□□□□□ -0.35
Col4a6B1AVK5 AC124457.1-201ENSMUST00000198845 120 ntBASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Ddo-207ENSMUST00000216830 806 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Gm18041-201ENSMUST00000218210 618 ntBASIC12.86□□□□□ -0.35
Col4a6B1AVK5 AC122408.1-201ENSMUST00000218949 218 ntBASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Gm34809-203ENSMUST00000222945 509 ntTSL 5 BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 AC166344.1-201ENSMUST00000223745 674 ntBASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Gm5705-201ENSMUST00000066241 711 ntBASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Cldn17-201ENSMUST00000069549 1172 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Mia-201ENSMUST00000071986 566 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Olfr1428-201ENSMUST00000087824 945 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Ubc-203ENSMUST00000156249 2581 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Lsp1-201ENSMUST00000018963 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Fam227a-204ENSMUST00000187519 2283 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Thap1-201ENSMUST00000036807 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Ebp-201ENSMUST00000033509 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Pex3-201ENSMUST00000019945 2129 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Gm37131-201ENSMUST00000192502 1561 ntBASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Tmem30b-201ENSMUST00000042975 2991 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Tk1-201ENSMUST00000026661 1440 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Tcn2-201ENSMUST00000020710 1897 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Mrpl55-202ENSMUST00000108784 729 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Nop56-204ENSMUST00000136621 868 ntTSL 5 BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Gm6485-201ENSMUST00000160676 439 ntBASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Coa3-202ENSMUST00000168089 291 ntTSL 3 BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 F12-202ENSMUST00000170921 478 ntTSL 3 BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Isl1-202ENSMUST00000176044 1198 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Gm8888-201ENSMUST00000177677 381 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Gm28686-201ENSMUST00000187404 609 ntBASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Pgam2-201ENSMUST00000020768 840 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Gm31479-201ENSMUST00000209936 522 ntTSL 3 BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC12.86□□□□□ -0.35
Col4a6B1AVK5 Smad4-202ENSMUST00000114939 2233 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Edem1-201ENSMUST00000089162 5817 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Pcp4l1-201ENSMUST00000111332 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Slc6a18-208ENSMUST00000222029 2005 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 1700003D09Rik-201ENSMUST00000141929 1389 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Col4a6B1AVK5 Rab13-202ENSMUST00000107373 1415 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 72.7 ms