Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Pi16-202ENSMUST00000114701 2756 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Flcn-202ENSMUST00000091246 2768 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Sdc1-201ENSMUST00000020911 3157 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Vmn1r45-202ENSMUST00000226167 2893 ntBASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Matn2-203ENSMUST00000226766 3252 ntBASIC10.75□□□□□ -0.69
Trav5-4A0A075B652 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Rcor3-201ENSMUST00000073279 3748 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Pbxip1-201ENSMUST00000038942 4479 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Eng-202ENSMUST00000113272 3021 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Pabpc4-202ENSMUST00000080178 3019 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Setdb1-202ENSMUST00000107170 4622 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Dysf-205ENSMUST00000113823 6578 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Fbf1-202ENSMUST00000106435 4651 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Ssh1-201ENSMUST00000077689 3164 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Zfp64-201ENSMUST00000087971 2438 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Gldnos-201ENSMUST00000149237 841 ntTSL 2 BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Gm16046-203ENSMUST00000150889 1001 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Gm5866-201ENSMUST00000177881 973 ntBASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 AL593843.1-201ENSMUST00000195891 145 ntBASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 AC135669.1-201ENSMUST00000213585 412 ntBASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Gm7446-201ENSMUST00000221035 1240 ntBASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Fam173a-201ENSMUST00000072735 800 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Ccdc58-201ENSMUST00000099937 747 ntTSL 3 BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Tnn-202ENSMUST00000131919 3987 ntTSL 5 BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 4930444K16Rik-201ENSMUST00000220438 1767 ntBASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Adcy9-201ENSMUST00000005719 4457 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Myo16-203ENSMUST00000207477 7169 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Fn3k-202ENSMUST00000092302 1803 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Sox7-201ENSMUST00000079652 3299 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Ttyh1-202ENSMUST00000079415 2882 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Vwa7-201ENSMUST00000007245 4313 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 AC124577.2-201ENSMUST00000217413 2420 ntBASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Abhd18-202ENSMUST00000108078 2492 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Pkm-202ENSMUST00000163694 2041 ntAPPRIS ALT1 TSL 5 BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
Trav5-4A0A075B652 Gm15567-201ENSMUST00000148699 2130 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Cdc45-201ENSMUST00000000028 2143 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Unc45a-201ENSMUST00000032748 3260 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Samd5-201ENSMUST00000100070 6818 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Mixl1-201ENSMUST00000027778 2294 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Madd-209ENSMUST00000111371 5816 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Madd-210ENSMUST00000111372 5813 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Rad9b-202ENSMUST00000117263 2371 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Fam173b-203ENSMUST00000161061 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Acly-203ENSMUST00000107389 4426 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 2700012I20Rik-201ENSMUST00000180525 684 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Gm15823-201ENSMUST00000064305 670 ntBASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Tmem104-202ENSMUST00000100235 4561 ntAPPRIS ALT1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Tmem104-201ENSMUST00000061450 4564 ntAPPRIS P2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Car10-206ENSMUST00000107863 3334 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
Trav5-4A0A075B652 Bcas3-202ENSMUST00000092821 2769 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms