Protein–RNA interactions for Protein: A0A075B641

Trav8-1, T cell receptor alpha variable 8-1 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav8-1A0A075B641 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 4933412E12Rik-201ENSMUST00000217853 1698 ntTSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Mmd2-201ENSMUST00000037048 3317 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Nek3-202ENSMUST00000110730 2050 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Fam53b-207ENSMUST00000106169 4536 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gtf3c1-204ENSMUST00000205659 6570 ntAPPRIS ALT2 TSL 5 BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Gm43622-201ENSMUST00000200140 2019 ntBASIC9.15□□□□□ -0.94
Trav8-1A0A075B641 Unkl-204ENSMUST00000160896 4787 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Trav8-1A0A075B641 C530043K16Rik-201ENSMUST00000201865 3109 ntBASIC9.15□□□□□ -0.95
Trav8-1A0A075B641 Slc44a2-201ENSMUST00000034697 3456 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav8-1A0A075B641 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Trav8-1A0A075B641 Ppp3cb-202ENSMUST00000159027 3831 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav8-1A0A075B641 Slc25a24-201ENSMUST00000029477 3431 ntAPPRIS P1 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav8-1A0A075B641 Kcns2-202ENSMUST00000228725 4906 ntAPPRIS P1 BASIC9.15□□□□□ -0.95
Trav8-1A0A075B641 Sufu-201ENSMUST00000039922 4522 ntAPPRIS P3 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav8-1A0A075B641 Cdv3-203ENSMUST00000116517 3741 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Trav8-1A0A075B641 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Trav8-1A0A075B641 Cbl-211ENSMUST00000206720 11372 ntAPPRIS P2 TSL 1 (best) BASIC9.15□□□□□ -0.95
Trav8-1A0A075B641 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Trav8-1A0A075B641 Gm12802-201ENSMUST00000145510 1813 ntTSL 1 (best) BASIC9.15□□□□□ -0.95
Trav8-1A0A075B641 Zfp629-202ENSMUST00000084564 5829 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Adgre5-203ENSMUST00000109802 2867 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Pdcd11-201ENSMUST00000072141 6041 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Gm15411-201ENSMUST00000133243 3488 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Egfl7-212ENSMUST00000166920 1391 ntAPPRIS P4 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Alx1-203ENSMUST00000167156 2689 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Add1-202ENSMUST00000052836 2337 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Ankrd52-201ENSMUST00000014642 6620 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Prrt3-204ENSMUST00000205075 1956 ntAPPRIS ALT2 TSL 2 BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Tom1l2-204ENSMUST00000095254 4940 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Gm4316-201ENSMUST00000212411 2617 ntTSL 5 BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Zscan22-201ENSMUST00000055528 2620 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Gm37600-201ENSMUST00000193764 3292 ntBASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Rab3d-203ENSMUST00000122211 3886 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Ap1g2-211ENSMUST00000170285 2596 ntAPPRIS P1 TSL 5 BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Reep2-201ENSMUST00000043484 1926 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Gm6222-201ENSMUST00000120787 396 ntBASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Mir7221-201ENSMUST00000184009 72 ntBASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Gm45841-201ENSMUST00000207700 164 ntBASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 AC166341.4-201ENSMUST00000220625 123 ntBASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Myo18a-211ENSMUST00000130627 6202 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Gm43365-201ENSMUST00000196522 2106 ntBASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Rps6ka6-210ENSMUST00000137712 2410 ntAPPRIS ALT2 TSL 5 BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Slc10a7-201ENSMUST00000034111 3595 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Nudt15-201ENSMUST00000043813 3579 ntAPPRIS P1 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Phactr1-206ENSMUST00000131942 2056 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Rnf123-218ENSMUST00000178267 4309 ntAPPRIS P3 TSL 5 BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Adamtsl3-204ENSMUST00000173828 2292 ntTSL 5 BASIC9.14□□□□□ -0.95
Trav8-1A0A075B641 Ppil2-203ENSMUST00000115721 3088 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Sppl2b-211ENSMUST00000220091 3629 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Rims1-204ENSMUST00000097810 6362 ntAPPRIS ALT2 TSL 5 BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Spata13-210ENSMUST00000162945 5469 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Zfp518b-203ENSMUST00000179555 6816 ntAPPRIS P1 TSL 2 BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Pla2g15-201ENSMUST00000034377 2706 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Pag1-201ENSMUST00000108384 3729 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Polm-201ENSMUST00000020767 2924 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Gm42466-201ENSMUST00000202099 1301 ntBASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Usp14-201ENSMUST00000092096 2360 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Pex2-206ENSMUST00000195855 1587 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Supt16-201ENSMUST00000046709 4673 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Gm44942-201ENSMUST00000096093 2072 ntBASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Rbm12b2-201ENSMUST00000063839 3327 ntAPPRIS P1 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Zfp710-202ENSMUST00000164056 5871 ntAPPRIS P4 TSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Gm2810-201ENSMUST00000118681 990 ntBASIC9.13□□□□□ -0.95
Trav8-1A0A075B641 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC9.13□□□□□ -0.95
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms