Protein–RNA interactions for Protein: Q9Z1B8

Phf1, PHD finger protein 1, mousemouse

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Phf1Q9Z1B8 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Ppl-201ENSMUST00000035672 6277 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Neurog3-201ENSMUST00000050103 1540 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Phf1Q9Z1B8 Arhgap11a-201ENSMUST00000102545 4958 ntAPPRIS P2 TSL 5 BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Gm14608-201ENSMUST00000120030 1553 ntBASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Ccr7-201ENSMUST00000103134 1978 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Gm3693-201ENSMUST00000182077 2865 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Gm14723-201ENSMUST00000118686 215 ntBASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Gm6161-201ENSMUST00000121942 1102 ntBASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Hnrnpa3-207ENSMUST00000164947 1074 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Gm6254-201ENSMUST00000168178 1072 ntBASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Gm6153-201ENSMUST00000172004 1058 ntBASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Gm37008-201ENSMUST00000195712 319 ntBASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Gm5641-202ENSMUST00000198699 1080 ntBASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Gm43118-201ENSMUST00000199149 775 ntBASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Gm32926-201ENSMUST00000214043 681 ntTSL 3 BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 AC134254.1-201ENSMUST00000221362 167 ntBASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Gm17383-201ENSMUST00000078739 1041 ntBASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Avpr2-201ENSMUST00000033765 1812 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Ccrl2-203ENSMUST00000199839 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Pphln1-202ENSMUST00000068457 3816 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Fgfr3-211ENSMUST00000171509 4020 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Gm44851-201ENSMUST00000205735 2309 ntBASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Phf1Q9Z1B8 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 4931406C07Rik-208ENSMUST00000216955 1750 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Dcaf4-208ENSMUST00000223291 2005 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Gm10305-201ENSMUST00000195331 2475 ntBASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Slc22a13b-ps-201ENSMUST00000173185 1458 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Gm11978-201ENSMUST00000122315 466 ntBASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Gm25927-201ENSMUST00000175058 117 ntBASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Asgr1-201ENSMUST00000018699 1259 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Gm39318-201ENSMUST00000214606 1118 ntTSL 3 BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 AC133598.1-201ENSMUST00000224327 660 ntBASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 AC151895.1-201ENSMUST00000219025 1742 ntBASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Smg7-203ENSMUST00000111836 3928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Pxn-202ENSMUST00000086523 2667 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Gm26616-202ENSMUST00000195676 3107 ntBASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Gm36356-201ENSMUST00000209224 2277 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Pou5f2-201ENSMUST00000175955 1394 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Phf1Q9Z1B8 Fip1l1-201ENSMUST00000080164 4673 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf1Q9Z1B8 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf1Q9Z1B8 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf1Q9Z1B8 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.78□□□□□ -0.52
Phf1Q9Z1B8 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Phf1Q9Z1B8 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf1Q9Z1B8 Kcnc1-203ENSMUST00000160433 3156 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf1Q9Z1B8 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Phf1Q9Z1B8 Ccnc-204ENSMUST00000120679 1453 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Phf1Q9Z1B8 Pbrm1-206ENSMUST00000112094 5154 ntAPPRIS P5 TSL 5 BASIC11.78□□□□□ -0.52
Phf1Q9Z1B8 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Phf1Q9Z1B8 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Phf1Q9Z1B8 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 66.4 ms