Protein–RNA interactions for Protein: Q9Z0H3

Smarcb1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1, mousemouse

Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Smarcb1Q9Z0H3 Gm20470-201ENSMUST00000174654 331 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Erdr1-201ENSMUST00000177591 774 ntAPPRIS P5 TSL 5 BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Gm4959-201ENSMUST00000197271 1044 ntBASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 AC093022.1-201ENSMUST00000226949 1072 ntBASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 H2-Ob-204ENSMUST00000173764 1319 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Tubb2a-ps2-201ENSMUST00000221547 1339 ntBASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Hmga1-203ENSMUST00000117600 1635 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Prrxl1-201ENSMUST00000068938 1610 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Hspa8-202ENSMUST00000117557 2019 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 B230344G16Rik-201ENSMUST00000180782 2024 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.29
Smarcb1Q9Z0H3 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Mau2-201ENSMUST00000050561 5369 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 2310035C23Rik-201ENSMUST00000039173 4328 ntAPPRIS P3 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Smarca4-204ENSMUST00000174008 5405 ntAPPRIS ALT1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Gm24830-201ENSMUST00000102024 166 ntBASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Sema3b-205ENSMUST00000102532 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Gm23270-201ENSMUST00000104055 131 ntBASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Odf3-202ENSMUST00000106049 1509 ntTSL 5 BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Tpm1-207ENSMUST00000113687 962 ntTSL 5 BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 C330007P06Rik-203ENSMUST00000115249 1145 ntTSL 5 BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Pdlim2-205ENSMUST00000129174 729 ntTSL 2 BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Gm15276-201ENSMUST00000145953 498 ntBASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Gm829-202ENSMUST00000146622 722 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Gm25043-201ENSMUST00000158604 212 ntBASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Gm25890-201ENSMUST00000177643 165 ntBASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Rnu1b2-201ENSMUST00000178073 165 ntBASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Rnu1b1-201ENSMUST00000178250 165 ntBASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Gm22614-201ENSMUST00000178300 165 ntBASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Gm3096-201ENSMUST00000185770 364 ntBASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Gm29054-201ENSMUST00000187589 1185 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 1700031P21Rik-203ENSMUST00000191400 466 ntTSL 3 BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Gm45184-201ENSMUST00000206354 955 ntTSL 5 BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Gm9176-201ENSMUST00000219955 1120 ntBASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 AC126253.1-202ENSMUST00000226732 835 ntBASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Cutal-201ENSMUST00000028228 2179 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Psmb2-201ENSMUST00000030642 859 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Prss42-201ENSMUST00000035715 1584 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Gm22042-201ENSMUST00000082989 165 ntBASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Gm26232-201ENSMUST00000083360 166 ntBASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Gm24136-201ENSMUST00000083374 165 ntBASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Rnu1b6-201ENSMUST00000083839 166 ntBASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Gm26110-201ENSMUST00000083971 165 ntBASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Gm16519-201ENSMUST00000092011 489 ntAPPRIS P1 BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Frzb-201ENSMUST00000028389 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.29
Smarcb1Q9Z0H3 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Smarcb1Q9Z0H3 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC13.25□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 65.1 ms