Protein–RNA interactions for Protein: Q9WUB7

Clcnka, Chloride channel protein ClC-Ka, mousemouse

Predictions only

Length 687 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ClcnkaQ9WUB7 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Sgk1-204ENSMUST00000120509 3096 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Mul1-202ENSMUST00000105813 3944 ntTSL 5 BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Tnip1-204ENSMUST00000108885 2686 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Rhbdd2-201ENSMUST00000043707 4207 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Gm12203-201ENSMUST00000118235 598 ntBASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Gm12209-201ENSMUST00000120089 596 ntBASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Gm27847-201ENSMUST00000183711 107 ntBASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Gm5745-201ENSMUST00000183748 313 ntBASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Gm27375-201ENSMUST00000183799 107 ntBASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Gm37922-201ENSMUST00000195596 455 ntBASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 AC155237.1-201ENSMUST00000226196 1279 ntBASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Ints5-201ENSMUST00000096249 3294 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Dab2ip-205ENSMUST00000112986 5580 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Chst15-201ENSMUST00000077472 5041 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Lzts3-202ENSMUST00000089561 4169 ntAPPRIS P3 TSL 5 BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Rnf44-218ENSMUST00000177950 3941 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Dcun1d3-201ENSMUST00000059851 5985 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Pitpnb-204ENSMUST00000200298 2632 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Nfkb2-202ENSMUST00000111881 3205 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Ccdc126-202ENSMUST00000114491 2372 ntTSL 5 BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 B4galnt3-203ENSMUST00000212457 2958 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
ClcnkaQ9WUB7 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Gm8798-201ENSMUST00000211877 1661 ntBASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Apol9b-201ENSMUST00000109775 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Vmn1r198-203ENSMUST00000226909 6259 ntAPPRIS P2 BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Alppl2-202ENSMUST00000188310 2016 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Smug1-201ENSMUST00000064067 3281 ntAPPRIS P1 TSL 2 BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Clpx-202ENSMUST00000113824 2809 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Ddr1-204ENSMUST00000119825 3769 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Ap1g2-201ENSMUST00000036041 2673 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Gm45684-201ENSMUST00000210244 1571 ntBASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Gm8805-201ENSMUST00000117848 313 ntBASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Gm12539-201ENSMUST00000121549 1098 ntBASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Gm13123-201ENSMUST00000122173 492 ntBASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Mthfsd-206ENSMUST00000133037 1060 ntTSL 5 BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Gm22331-201ENSMUST00000158066 136 ntBASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Gm28693-202ENSMUST00000190758 331 ntBASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Pcdhb1-201ENSMUST00000052366 2588 ntAPPRIS P1 BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Calcr-204ENSMUST00000170266 2175 ntAPPRIS P4 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Bend3-201ENSMUST00000040147 5882 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Anks1b-221ENSMUST00000182786 3042 ntTSL 5 BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Syde2-203ENSMUST00000200546 4712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Suclg1-201ENSMUST00000064740 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
ClcnkaQ9WUB7 Vps29-208ENSMUST00000155671 2716 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Sgk3-201ENSMUST00000097826 2728 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Dus2-201ENSMUST00000034375 1860 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 AC101945.2-201ENSMUST00000227886 1377 ntBASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC11.8□□□□□ -0.52
ClcnkaQ9WUB7 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 64.6 ms