Protein–RNA interactions for Protein: Q9WU28

Pfdn5, Prefoldin subunit 5, mousemouse

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pfdn5Q9WU28 Gm5475-202ENSMUST00000148928 2320 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.72
Pfdn5Q9WU28 Tiam1-203ENSMUST00000114122 4596 ntTSL 1 (best) BASIC10.52□□□□□ -0.72
Pfdn5Q9WU28 Lrrc30-201ENSMUST00000097290 1759 ntAPPRIS P1 BASIC10.52□□□□□ -0.72
Pfdn5Q9WU28 Tspan2-201ENSMUST00000029451 4484 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Myo18a-222ENSMUST00000168348 6582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 AU022754-201ENSMUST00000180441 2976 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Eif4e2-206ENSMUST00000113233 1807 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Zbtb21-202ENSMUST00000063605 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Akap10-203ENSMUST00000108710 3394 ntTSL 2 BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Asphd1-202ENSMUST00000106339 518 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Gm15653-201ENSMUST00000119247 907 ntBASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Ube4bos1-202ENSMUST00000151896 1286 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 AC155252.2-201ENSMUST00000226946 680 ntBASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Myadm-203ENSMUST00000203328 1899 ntAPPRIS P1 TSL 2 BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Galr1-201ENSMUST00000065224 2871 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Rgs3-205ENSMUST00000107424 4084 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Myh8-201ENSMUST00000019625 6149 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Hkdc1-201ENSMUST00000020277 3517 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Togaram1-201ENSMUST00000066296 6372 ntAPPRIS P2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Mapk8ip3-202ENSMUST00000115228 5424 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Gja5-203ENSMUST00000199597 3668 ntTSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Anp32e-202ENSMUST00000165307 3274 ntAPPRIS P3 TSL 1 (best) BASIC10.52□□□□□ -0.73
Pfdn5Q9WU28 Rgs11-202ENSMUST00000122058 2005 ntAPPRIS ALT2 TSL 2 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Il6st-201ENSMUST00000070731 5207 ntAPPRIS P2 TSL 5 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Fasn-205ENSMUST00000206589 8333 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Grpel2-201ENSMUST00000062991 4030 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Anks1b-224ENSMUST00000182960 3397 ntTSL 5 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Pcdh12-203ENSMUST00000194012 2702 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Gatad2a-201ENSMUST00000065169 3812 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Gm29609-201ENSMUST00000101411 3223 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Rab31-201ENSMUST00000070673 3476 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Chrd-201ENSMUST00000007171 3275 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Atl3-202ENSMUST00000170373 6474 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Cdc14a-201ENSMUST00000090464 4485 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Smarca2-209ENSMUST00000176030 5862 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Gm24543-201ENSMUST00000103867 82 ntBASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Gm11508-201ENSMUST00000129337 440 ntTSL 2 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Gm15948-201ENSMUST00000150616 403 ntTSL 3 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 BC031181-201ENSMUST00000040284 1047 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Cep170b-201ENSMUST00000092279 3817 ntTSL 5 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Olfr1214-201ENSMUST00000099804 936 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Trpc7-206ENSMUST00000173513 2241 ntTSL 5 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Plekhn1-202ENSMUST00000105571 2004 ntTSL 5 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Rpl22-208ENSMUST00000188151 2048 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Robo4-201ENSMUST00000102895 3226 ntAPPRIS P3 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Cngb1-203ENSMUST00000120044 3243 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Bhlha15-201ENSMUST00000060747 3494 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Madd-213ENSMUST00000111376 5927 ntAPPRIS ALT2 TSL 5 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Aaas-201ENSMUST00000041208 1816 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Coq8a-201ENSMUST00000027766 4026 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Gypc-202ENSMUST00000174000 2072 ntAPPRIS ALT2 TSL 3 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 CT009713.5-203ENSMUST00000224218 2079 ntBASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Timm22-201ENSMUST00000021203 2817 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Bcl2l2-203ENSMUST00000133397 3813 ntTSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Olfr1234-202ENSMUST00000111543 1386 ntAPPRIS P1 TSL 2 BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Pfdn5Q9WU28 Slc38a8-201ENSMUST00000036748 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.51□□□□□ -0.73
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms