Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Spred1-201ENSMUST00000028829 6016 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Tor1aip2-207ENSMUST00000128941 2925 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Gm14123-201ENSMUST00000156345 2658 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Trpv1-201ENSMUST00000006106 2340 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 AC154262.2-202ENSMUST00000225158 1331 ntBASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Clic3-202ENSMUST00000114265 808 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Gm14130-201ENSMUST00000118417 987 ntBASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Gm15808-201ENSMUST00000119046 604 ntBASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Gm6963-201ENSMUST00000147879 379 ntBASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Gm14286-201ENSMUST00000155674 464 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Gm8856-201ENSMUST00000185254 1144 ntBASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Vmo1-201ENSMUST00000021179 672 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Gm8712-201ENSMUST00000221090 701 ntBASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 AC161537.1-201ENSMUST00000226199 1015 ntBASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Ppp1r2-ps3-201ENSMUST00000078012 627 ntBASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Gm853-201ENSMUST00000023884 2314 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Mrps35-201ENSMUST00000036111 4162 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Doc2b-201ENSMUST00000021209 4361 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Scn8aQ9WTU3 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Gm15236-201ENSMUST00000117309 379 ntBASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Gm4760-201ENSMUST00000119663 1030 ntBASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Gm15276-201ENSMUST00000145953 498 ntBASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 C230066G23Rik-201ENSMUST00000150195 650 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Ccdc28a-203ENSMUST00000173243 590 ntTSL 5 BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Gm4857-201ENSMUST00000192718 785 ntBASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Gm2420-203ENSMUST00000202748 447 ntTSL 5 BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Gm31793-201ENSMUST00000218557 415 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 CT025533.2-201ENSMUST00000228715 1248 ntBASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Gm10076-201ENSMUST00000073238 384 ntBASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Olfr156-202ENSMUST00000079465 1099 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Kcnc2-204ENSMUST00000219301 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 AC122197.2-201ENSMUST00000219196 1635 ntBASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Cyp4f17-201ENSMUST00000165999 1693 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Zfp1-203ENSMUST00000212072 1930 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Gm45266-201ENSMUST00000210111 2173 ntBASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Prr29-202ENSMUST00000106816 771 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 F630206G17Rik-201ENSMUST00000137002 685 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Gm25700-201ENSMUST00000177693 110 ntBASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Gm9022-201ENSMUST00000182482 992 ntBASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Gm7619-201ENSMUST00000210649 1282 ntBASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Scn8aQ9WTU3 Arfgap1-204ENSMUST00000108861 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scn8aQ9WTU3 Gpatch4-203ENSMUST00000193398 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scn8aQ9WTU3 Gm12968-201ENSMUST00000138291 1454 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Scn8aQ9WTU3 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Scn8aQ9WTU3 Mtm1-203ENSMUST00000061970 3379 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scn8aQ9WTU3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.36
Scn8aQ9WTU3 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Scn8aQ9WTU3 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scn8aQ9WTU3 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC12.77□□□□□ -0.36
Scn8aQ9WTU3 Kalrn-209ENSMUST00000114963 3207 ntTSL 5 BASIC12.77□□□□□ -0.36
Scn8aQ9WTU3 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scn8aQ9WTU3 Exd2-201ENSMUST00000038185 3310 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Scn8aQ9WTU3 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Scn8aQ9WTU3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms