Protein–RNA interactions for Protein: Q9R049

Amfr, E3 ubiquitin-protein ligase AMFR, mousemouse

Predictions only

Length 643 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AmfrQ9R049 Plk-ps1-201ENSMUST00000119494 1787 ntBASIC14.34□□□□□ -0.11
AmfrQ9R049 C030034I22Rik-202ENSMUST00000188481 4231 ntBASIC14.34□□□□□ -0.11
AmfrQ9R049 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AmfrQ9R049 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
AmfrQ9R049 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
AmfrQ9R049 Zbtb42-203ENSMUST00000174780 3160 ntTSL 2 BASIC14.34□□□□□ -0.11
AmfrQ9R049 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
AmfrQ9R049 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
AmfrQ9R049 Git1-201ENSMUST00000037285 3512 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.11
AmfrQ9R049 Zkscan3-207ENSMUST00000223831 2101 ntBASIC14.33□□□□□ -0.11
AmfrQ9R049 Tgm1-202ENSMUST00000168729 2852 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
AmfrQ9R049 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
AmfrQ9R049 Fsd1-201ENSMUST00000011733 1748 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AmfrQ9R049 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AmfrQ9R049 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
AmfrQ9R049 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AmfrQ9R049 Kifc1-201ENSMUST00000114361 2260 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
AmfrQ9R049 Zfp954-201ENSMUST00000056246 2042 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AmfrQ9R049 4933406P04Rik-201ENSMUST00000092680 1789 ntBASIC14.33□□□□□ -0.12
AmfrQ9R049 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AmfrQ9R049 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC14.33□□□□□ -0.12
AmfrQ9R049 Leng8-202ENSMUST00000117274 874 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AmfrQ9R049 Gm12384-201ENSMUST00000119228 919 ntBASIC14.33□□□□□ -0.12
AmfrQ9R049 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC14.33□□□□□ -0.12
AmfrQ9R049 Gm4271-201ENSMUST00000174444 973 ntBASIC14.33□□□□□ -0.12
AmfrQ9R049 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
AmfrQ9R049 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
AmfrQ9R049 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC14.33□□□□□ -0.12
AmfrQ9R049 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC14.33□□□□□ -0.12
AmfrQ9R049 Gm45564-201ENSMUST00000210460 530 ntTSL 5 BASIC14.33□□□□□ -0.12
AmfrQ9R049 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AmfrQ9R049 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
AmfrQ9R049 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AmfrQ9R049 Arhgap22-202ENSMUST00000111956 2596 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
AmfrQ9R049 Asl-202ENSMUST00000159619 2088 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
AmfrQ9R049 Gm45684-201ENSMUST00000210244 1571 ntBASIC14.33□□□□□ -0.12
AmfrQ9R049 Sipa1l3-207ENSMUST00000182484 2420 ntTSL 5 BASIC14.33□□□□□ -0.12
AmfrQ9R049 Vwf-202ENSMUST00000112253 2184 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
AmfrQ9R049 Ttc25-202ENSMUST00000092684 2240 ntAPPRIS P2 TSL 1 (best) BASIC14.33□□□□□ -0.12
AmfrQ9R049 Unk-202ENSMUST00000106452 3696 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
AmfrQ9R049 Dnmt3a-201ENSMUST00000020991 9685 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AmfrQ9R049 Serpine3-201ENSMUST00000171692 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AmfrQ9R049 Gpr35-205ENSMUST00000186298 2647 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AmfrQ9R049 AC131068.2-201ENSMUST00000226175 1453 ntBASIC14.32□□□□□ -0.12
AmfrQ9R049 Gm43045-201ENSMUST00000198725 2095 ntBASIC14.32□□□□□ -0.12
AmfrQ9R049 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AmfrQ9R049 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AmfrQ9R049 Acer1-201ENSMUST00000056113 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AmfrQ9R049 Gm44414-201ENSMUST00000203660 2109 ntBASIC14.32□□□□□ -0.12
AmfrQ9R049 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AmfrQ9R049 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AmfrQ9R049 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AmfrQ9R049 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
AmfrQ9R049 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AmfrQ9R049 Gm27731-201ENSMUST00000185192 107 ntBASIC14.32□□□□□ -0.12
AmfrQ9R049 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC14.32□□□□□ -0.12
AmfrQ9R049 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.32□□□□□ -0.12
AmfrQ9R049 AC154276.1-201ENSMUST00000228874 1299 ntBASIC14.32□□□□□ -0.12
AmfrQ9R049 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AmfrQ9R049 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AmfrQ9R049 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
AmfrQ9R049 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AmfrQ9R049 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AmfrQ9R049 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC14.32□□□□□ -0.12
AmfrQ9R049 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AmfrQ9R049 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.32□□□□□ -0.12
AmfrQ9R049 Sh3bp5l-202ENSMUST00000116376 3016 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AmfrQ9R049 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC14.32□□□□□ -0.12
AmfrQ9R049 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
AmfrQ9R049 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
AmfrQ9R049 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
AmfrQ9R049 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AmfrQ9R049 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
AmfrQ9R049 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
AmfrQ9R049 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
AmfrQ9R049 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AmfrQ9R049 Pla2g6-201ENSMUST00000047816 2963 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AmfrQ9R049 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
AmfrQ9R049 Gm36864-203ENSMUST00000223070 1513 ntAPPRIS P5 TSL 5 BASIC14.31□□□□□ -0.12
AmfrQ9R049 Plekhg2-202ENSMUST00000119990 4880 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
AmfrQ9R049 Gnai3-201ENSMUST00000000001 3262 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AmfrQ9R049 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AmfrQ9R049 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AmfrQ9R049 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AmfrQ9R049 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AmfrQ9R049 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC14.31□□□□□ -0.12
AmfrQ9R049 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AmfrQ9R049 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC14.31□□□□□ -0.12
AmfrQ9R049 Gm37922-201ENSMUST00000195596 455 ntBASIC14.31□□□□□ -0.12
AmfrQ9R049 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC14.31□□□□□ -0.12
AmfrQ9R049 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.31□□□□□ -0.12
AmfrQ9R049 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AmfrQ9R049 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AmfrQ9R049 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AmfrQ9R049 Gm16372-201ENSMUST00000073088 450 ntBASIC14.31□□□□□ -0.12
AmfrQ9R049 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC14.31□□□□□ -0.12
AmfrQ9R049 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
AmfrQ9R049 Mkl1-209ENSMUST00000149582 4366 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
AmfrQ9R049 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC14.31□□□□□ -0.12
AmfrQ9R049 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms