Protein–RNA interactions for Protein: Q9QXK7

Cpsf3, Cleavage and polyadenylation specificity factor subunit 3, mousemouse

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf3Q9QXK7 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Banp-210ENSMUST00000173254 1521 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Fancc-202ENSMUST00000099444 2288 ntTSL 5 BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Gm3756-201ENSMUST00000169182 1355 ntBASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Gm26799-201ENSMUST00000180959 1361 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Ckm-203ENSMUST00000208710 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Gm11661-201ENSMUST00000121761 1327 ntBASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Dlgap1-202ENSMUST00000097288 2626 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Daam2-202ENSMUST00000224595 1926 ntBASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Marco-201ENSMUST00000027639 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Pisd-ps1-203ENSMUST00000145164 789 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Gm20416-201ENSMUST00000174760 484 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Mir8109-201ENSMUST00000184375 117 ntBASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Gm29396-201ENSMUST00000185659 716 ntBASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 AC162938.2-203ENSMUST00000216604 1134 ntTSL 5 BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 AC154305.4-201ENSMUST00000224520 614 ntBASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Vmn1r217-201ENSMUST00000091721 897 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Mavs-202ENSMUST00000110199 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Gm5422-202ENSMUST00000216161 2928 ntTSL 5 BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Gm37861-201ENSMUST00000193534 2869 ntBASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Gm26519-201ENSMUST00000181193 2249 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Cpsf3Q9QXK7 Gm37827-201ENSMUST00000194486 1542 ntBASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Gm42863-201ENSMUST00000197875 2958 ntBASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Afmid-201ENSMUST00000073388 2327 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 D6Ertd527e-203ENSMUST00000203747 2216 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 1700042G07Rik-201ENSMUST00000106492 385 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Phlda2-201ENSMUST00000010904 757 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Gm15198-201ENSMUST00000117283 177 ntBASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Igfbp2-202ENSMUST00000120564 991 ntTSL 3 BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Mospd4-201ENSMUST00000180618 576 ntBASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Tmem176b-209ENSMUST00000204073 986 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Gm18935-201ENSMUST00000212692 664 ntBASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 AC159896.2-201ENSMUST00000214753 269 ntBASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Tmem108-206ENSMUST00000215136 724 ntTSL 3 BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 AC154319.1-201ENSMUST00000216330 312 ntBASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 AL589735.1-201ENSMUST00000224353 270 ntBASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Trem3-201ENSMUST00000048065 994 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Tle6-201ENSMUST00000072020 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Baiap2l1-201ENSMUST00000055190 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Hnrnpdl-202ENSMUST00000128187 2752 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Foxred2-202ENSMUST00000117725 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Cdk5rap3-201ENSMUST00000103152 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Gm8617-201ENSMUST00000118796 2222 ntBASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Cpsf3Q9QXK7 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf3Q9QXK7 Aph1a-201ENSMUST00000015894 2863 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf3Q9QXK7 Pfkfb3-204ENSMUST00000114844 2107 ntTSL 5 BASIC13.73□□□□□ -0.21
Cpsf3Q9QXK7 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf3Q9QXK7 Abhd1-202ENSMUST00000201125 1352 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf3Q9QXK7 Kcnt1-211ENSMUST00000171268 3771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf3Q9QXK7 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf3Q9QXK7 Pipox-201ENSMUST00000017597 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf3Q9QXK7 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Cpsf3Q9QXK7 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf3Q9QXK7 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf3Q9QXK7 Gart-201ENSMUST00000023684 3518 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf3Q9QXK7 0610010K14Rik-203ENSMUST00000100950 545 ntTSL 2 BASIC13.73□□□□□ -0.21
Cpsf3Q9QXK7 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC13.73□□□□□ -0.21
Cpsf3Q9QXK7 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf3Q9QXK7 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf3Q9QXK7 Atp6v0e-201ENSMUST00000015719 794 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Cpsf3Q9QXK7 Gm27516-201ENSMUST00000184237 98 ntBASIC13.73□□□□□ -0.21
Cpsf3Q9QXK7 Gm6007-201ENSMUST00000208170 823 ntBASIC13.73□□□□□ -0.21
Cpsf3Q9QXK7 Gm7046-201ENSMUST00000221351 977 ntBASIC13.73□□□□□ -0.21
Cpsf3Q9QXK7 Gm8227-201ENSMUST00000223306 571 ntBASIC13.73□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 57.9 ms