Protein–RNA interactions for Protein: Q9QWF0

Chaf1a, Chromatin assembly factor 1 subunit A, mousemouse

Predictions only

Length 911 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1aQ9QWF0 Gm17435-202ENSMUST00000212699 1998 ntBASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Samd4-201ENSMUST00000022386 4564 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Nxf1-211ENSMUST00000184970 5591 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Gm44086-201ENSMUST00000203251 2349 ntBASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Zfp467-204ENSMUST00000114559 3163 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Rnf14-201ENSMUST00000072376 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 AC093022.5-201ENSMUST00000226841 1079 ntBASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 CT025535.1-201ENSMUST00000227172 491 ntBASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Zfand4-202ENSMUST00000112900 3220 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Pfn4-204ENSMUST00000219503 4775 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Prickle1-202ENSMUST00000109255 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Tfe3-203ENSMUST00000101695 2989 ntTSL 5 BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Arid3b-209ENSMUST00000171444 4171 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Rpl9-204ENSMUST00000127874 2690 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Aff3-202ENSMUST00000039827 6010 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Plekhd1-201ENSMUST00000140770 3535 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Fmo1-202ENSMUST00000111518 1506 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Chaf1aQ9QWF0 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Krba1-202ENSMUST00000077093 8380 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Gm33543-203ENSMUST00000211096 1722 ntAPPRIS P5 TSL 5 BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Spata7-203ENSMUST00000101146 1913 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Micalcl-201ENSMUST00000033033 2259 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Dcaf1-202ENSMUST00000159645 4945 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Rubcn-202ENSMUST00000089684 5311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Prrc2b-202ENSMUST00000069817 10671 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Clspn-201ENSMUST00000048391 5027 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Plxdc1-201ENSMUST00000017561 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Gm28631-201ENSMUST00000190740 334 ntBASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Gm7558-201ENSMUST00000193221 1165 ntBASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Gabarapl1-204ENSMUST00000204956 539 ntAPPRIS P1 TSL 3 BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Gm18307-201ENSMUST00000206864 949 ntBASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Sorcs1-206ENSMUST00000209783 3489 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Nek1-209ENSMUST00000211672 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Gsn-205ENSMUST00000201185 2607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Slc12a8-206ENSMUST00000122427 2070 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Chaf1aQ9QWF0 Sorbs1-203ENSMUST00000165212 2175 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Cdkl2-203ENSMUST00000113140 2559 ntAPPRIS P4 TSL 5 BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Reps2-201ENSMUST00000101102 7630 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Rhobtb1-205ENSMUST00000164034 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Gm8617-201ENSMUST00000118796 2222 ntBASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 9530077C05Rik-201ENSMUST00000058868 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Col14a1-202ENSMUST00000110217 6457 ntAPPRIS ALT1 TSL 5 BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Rnps1-202ENSMUST00000115371 1617 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Fam214b-205ENSMUST00000107959 3060 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Gm14350-201ENSMUST00000116642 640 ntBASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Gm19220-201ENSMUST00000222682 803 ntBASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Eapp-201ENSMUST00000067272 590 ntTSL 3 BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Rgs6-222ENSMUST00000202210 3069 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Rnf4-201ENSMUST00000030992 2895 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Dock11-201ENSMUST00000033419 6665 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Pex5-205ENSMUST00000112532 3148 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Cdc37l1-208ENSMUST00000225310 4079 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Armc6-201ENSMUST00000019679 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Lenep-201ENSMUST00000057431 1806 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Trnt1-203ENSMUST00000113248 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Chaf1aQ9QWF0 4933427G23Rik-201ENSMUST00000122963 2515 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 104.5 ms