Protein–RNA interactions for Protein: Q9JM73

Srf, Serum response factor, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SrfQ9JM73 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SrfQ9JM73 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SrfQ9JM73 Spint5-201ENSMUST00000103097 443 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SrfQ9JM73 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
SrfQ9JM73 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.12□□□□□ -0.47
SrfQ9JM73 Gm13461-201ENSMUST00000120980 662 ntBASIC12.12□□□□□ -0.47
SrfQ9JM73 Gm14597-202ENSMUST00000129769 715 ntAPPRIS P5 TSL 3 BASIC12.12□□□□□ -0.47
SrfQ9JM73 Sncb-202ENSMUST00000134110 722 ntAPPRIS P1 TSL 3 BASIC12.12□□□□□ -0.47
SrfQ9JM73 Gm15884-201ENSMUST00000143765 643 ntTSL 3 BASIC12.12□□□□□ -0.47
SrfQ9JM73 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SrfQ9JM73 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SrfQ9JM73 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SrfQ9JM73 Spint5-202ENSMUST00000180193 443 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SrfQ9JM73 Gm28192-201ENSMUST00000189381 778 ntTSL 5 BASIC12.12□□□□□ -0.47
SrfQ9JM73 Gm18944-201ENSMUST00000207672 643 ntBASIC12.12□□□□□ -0.47
SrfQ9JM73 Gm45224-201ENSMUST00000208203 414 ntBASIC12.12□□□□□ -0.47
SrfQ9JM73 Cotl1-203ENSMUST00000211873 826 ntTSL 5 BASIC12.12□□□□□ -0.47
SrfQ9JM73 AC153974.2-201ENSMUST00000218577 1025 ntBASIC12.12□□□□□ -0.47
SrfQ9JM73 CT025552.1-201ENSMUST00000224561 521 ntBASIC12.12□□□□□ -0.47
SrfQ9JM73 Ly6g5c-201ENSMUST00000037849 509 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SrfQ9JM73 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SrfQ9JM73 Gm10076-201ENSMUST00000073238 384 ntBASIC12.12□□□□□ -0.47
SrfQ9JM73 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SrfQ9JM73 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SrfQ9JM73 Asb11-201ENSMUST00000033755 1369 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SrfQ9JM73 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SrfQ9JM73 Fnbp1-203ENSMUST00000100207 1680 ntTSL 5 BASIC12.12□□□□□ -0.47
SrfQ9JM73 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SrfQ9JM73 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SrfQ9JM73 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC12.12□□□□□ -0.47
SrfQ9JM73 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SrfQ9JM73 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SrfQ9JM73 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
SrfQ9JM73 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SrfQ9JM73 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
SrfQ9JM73 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
SrfQ9JM73 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
SrfQ9JM73 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
SrfQ9JM73 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
SrfQ9JM73 Gsdma2-201ENSMUST00000017355 1314 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Actg2-201ENSMUST00000075161 1333 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Hormad1-203ENSMUST00000107154 1444 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Eif4g1-205ENSMUST00000115461 5507 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
SrfQ9JM73 Nr3c1-203ENSMUST00000115567 6436 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Mpv17-202ENSMUST00000200744 1653 ntTSL 2 BASIC12.11□□□□□ -0.47
SrfQ9JM73 Spert-202ENSMUST00000164082 1560 ntAPPRIS ALT2 TSL 2 BASIC12.11□□□□□ -0.47
SrfQ9JM73 4930532G15Rik-202ENSMUST00000195314 1457 ntBASIC12.11□□□□□ -0.47
SrfQ9JM73 Prss30-201ENSMUST00000024936 1470 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Gm5884-201ENSMUST00000036712 1479 ntBASIC12.11□□□□□ -0.47
SrfQ9JM73 Defb30-202ENSMUST00000111207 989 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Gm14301-201ENSMUST00000120181 324 ntBASIC12.11□□□□□ -0.47
SrfQ9JM73 Gm5863-201ENSMUST00000121760 1008 ntBASIC12.11□□□□□ -0.47
SrfQ9JM73 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC12.11□□□□□ -0.47
SrfQ9JM73 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC12.11□□□□□ -0.47
SrfQ9JM73 Gm14133-201ENSMUST00000139471 1274 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 1110038B12Rik-203ENSMUST00000173070 434 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Gm29615-201ENSMUST00000185371 697 ntBASIC12.11□□□□□ -0.47
SrfQ9JM73 Gm3508-201ENSMUST00000186012 792 ntBASIC12.11□□□□□ -0.47
SrfQ9JM73 Gm28224-201ENSMUST00000186078 697 ntBASIC12.11□□□□□ -0.47
SrfQ9JM73 Gm29001-201ENSMUST00000186177 697 ntBASIC12.11□□□□□ -0.47
SrfQ9JM73 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.11□□□□□ -0.47
SrfQ9JM73 Gm28292-201ENSMUST00000186593 697 ntBASIC12.11□□□□□ -0.47
SrfQ9JM73 Gm28101-201ENSMUST00000187608 697 ntBASIC12.11□□□□□ -0.47
SrfQ9JM73 Gm29076-201ENSMUST00000187689 697 ntBASIC12.11□□□□□ -0.47
SrfQ9JM73 Gm28302-201ENSMUST00000187931 697 ntBASIC12.11□□□□□ -0.47
SrfQ9JM73 Gm28646-201ENSMUST00000188220 697 ntBASIC12.11□□□□□ -0.47
SrfQ9JM73 Gm28205-201ENSMUST00000189177 697 ntBASIC12.11□□□□□ -0.47
SrfQ9JM73 Gm29032-201ENSMUST00000189797 697 ntBASIC12.11□□□□□ -0.47
SrfQ9JM73 Gm28695-201ENSMUST00000190300 697 ntBASIC12.11□□□□□ -0.47
SrfQ9JM73 Gm38313-201ENSMUST00000191953 1266 ntBASIC12.11□□□□□ -0.47
SrfQ9JM73 Gm37448-201ENSMUST00000192795 697 ntBASIC12.11□□□□□ -0.47
SrfQ9JM73 Gm29707-202ENSMUST00000198744 659 ntTSL 3 BASIC12.11□□□□□ -0.47
SrfQ9JM73 Cacng1-201ENSMUST00000021065 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Olfr967-202ENSMUST00000213358 1210 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SrfQ9JM73 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC12.11□□□□□ -0.47
SrfQ9JM73 Gm18556-201ENSMUST00000219748 1031 ntBASIC12.11□□□□□ -0.47
SrfQ9JM73 AC138604.1-201ENSMUST00000226969 739 ntBASIC12.11□□□□□ -0.47
SrfQ9JM73 Ndufa3-201ENSMUST00000076657 515 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.11□□□□□ -0.47
SrfQ9JM73 Farsb-202ENSMUST00000170217 2036 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Gm10544-202ENSMUST00000181887 1923 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Wdr66-202ENSMUST00000121964 4873 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
SrfQ9JM73 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
SrfQ9JM73 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 71.3 ms