Protein–RNA interactions for Protein: Q9JKX8

Upk3a, Uroplakin-3a, mousemouse

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3aQ9JKX8 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Stx18-203ENSMUST00000114126 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Prkag3-202ENSMUST00000113672 2003 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Gm7789-202ENSMUST00000211273 1400 ntBASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Mat2b-202ENSMUST00000101347 2053 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Dnaja2-201ENSMUST00000034138 2919 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Lat2-205ENSMUST00000200998 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Nrsn2-201ENSMUST00000079278 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Rapgef3-217ENSMUST00000177352 3395 ntAPPRIS ALT1 TSL 5 BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Hist1h4b-201ENSMUST00000102965 397 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Gm11658-201ENSMUST00000120913 1008 ntBASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Gm8062-201ENSMUST00000139696 444 ntBASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Gm17180-201ENSMUST00000172211 435 ntTSL 3 BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Gm2467-201ENSMUST00000182266 1010 ntBASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Gm6981-201ENSMUST00000182467 1008 ntBASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Gm5850-201ENSMUST00000192923 1206 ntBASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Gm38002-201ENSMUST00000193255 180 ntBASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 AC155813.1-201ENSMUST00000213224 590 ntTSL 3 BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 AC133598.1-201ENSMUST00000224327 660 ntBASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Olfr223-201ENSMUST00000061293 1111 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Gm26035-201ENSMUST00000083065 308 ntBASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Hic2-201ENSMUST00000090190 6354 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Ntsr1-202ENSMUST00000170448 2594 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Auts2-208ENSMUST00000161374 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Lrrfip2-214ENSMUST00000217117 1363 ntTSL 5 BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Coa4-201ENSMUST00000054310 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Arhgap26-201ENSMUST00000097593 7898 ntAPPRIS P2 TSL 5 BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Spcs3-201ENSMUST00000067476 3466 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Upk3aQ9JKX8 Gm13293-201ENSMUST00000131188 1615 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Pja1-204ENSMUST00000113797 1676 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Apoc1-202ENSMUST00000108451 532 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Gm12742-201ENSMUST00000117326 410 ntBASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Trav4d-2-201ENSMUST00000120914 335 ntBASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Gm15420-201ENSMUST00000133274 382 ntTSL 3 BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 4833427G06Rik-201ENSMUST00000170947 973 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Tex9-206ENSMUST00000183574 1264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Gm38158-201ENSMUST00000194617 339 ntBASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Gm18054-201ENSMUST00000207539 555 ntBASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 AC169036.1-201ENSMUST00000227994 296 ntBASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Il25-201ENSMUST00000037863 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Gm22058-201ENSMUST00000083393 310 ntBASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Gm43823-201ENSMUST00000197391 1808 ntBASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Pdxdc1-204ENSMUST00000115804 2880 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Ssh1-204ENSMUST00000159592 8436 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Ackr4-202ENSMUST00000076147 2389 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Usp53-202ENSMUST00000197314 3586 ntTSL 5 BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Comt-204ENSMUST00000165430 1978 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Upk3aQ9JKX8 Gm26616-202ENSMUST00000195676 3107 ntBASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Fetub-203ENSMUST00000167399 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Actrt2-201ENSMUST00000060062 1435 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Gpr19-203ENSMUST00000111932 1711 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Elovl3-201ENSMUST00000043739 1494 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Gtf2i-201ENSMUST00000059042 4455 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 2900089D17Rik-201ENSMUST00000124015 2475 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 4930550L24Rik-201ENSMUST00000062542 1572 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Upk3aQ9JKX8 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 51.4 ms