Protein–RNA interactions for Protein: Q9D701

Upk3bl1, Uroplakin-3b-like protein 1, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Upk3bl1Q9D701 Lnx1-204ENSMUST00000117388 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Gm12537-201ENSMUST00000119266 1002 ntBASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Gm12070-201ENSMUST00000119551 1002 ntBASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Gm12671-201ENSMUST00000119978 1002 ntBASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Gm13292-201ENSMUST00000120014 1000 ntBASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Gm12403-201ENSMUST00000121384 959 ntBASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Tmsb15l-201ENSMUST00000127404 816 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Gm15492-201ENSMUST00000156734 606 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Gm10359-201ENSMUST00000180167 1002 ntBASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Gm12033-201ENSMUST00000180654 1002 ntBASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Gm5559-201ENSMUST00000180755 1002 ntBASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Gm4804-201ENSMUST00000182234 999 ntBASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Gm4335-201ENSMUST00000182581 1004 ntBASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Gm6312-201ENSMUST00000204060 1194 ntBASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Gm44251-201ENSMUST00000204963 442 ntBASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Gm5628-201ENSMUST00000222318 1049 ntBASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Atg7-212ENSMUST00000182902 2543 ntAPPRIS P3 TSL 2 BASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Kdm5c-201ENSMUST00000082177 5520 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Upk3bl1Q9D701 Rnf6-201ENSMUST00000067837 2388 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Upk3bl1Q9D701 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Upk3bl1Q9D701 Tbx4-203ENSMUST00000108047 3153 ntAPPRIS P1 TSL 5 BASIC11.71□□□□□ -0.54
Upk3bl1Q9D701 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Upk3bl1Q9D701 Rbm39-217ENSMUST00000146297 2580 ntAPPRIS ALT1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Upk3bl1Q9D701 Slx4ip-201ENSMUST00000028737 2556 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Upk3bl1Q9D701 Brwd1-201ENSMUST00000023631 8209 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Upk3bl1Q9D701 Chmp5-201ENSMUST00000030128 1519 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Stx17-201ENSMUST00000064765 1531 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Herc4-208ENSMUST00000219577 3914 ntAPPRIS ALT1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Pdcd4-202ENSMUST00000074371 2418 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Kank4-201ENSMUST00000102790 4795 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Bcar3-201ENSMUST00000029766 3311 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Chit1-202ENSMUST00000159963 1815 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Trim45-204ENSMUST00000134993 2274 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Syt16-203ENSMUST00000221220 8156 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Pabpc4-204ENSMUST00000106243 3111 ntAPPRIS ALT1 TSL 5 BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Nrn1-204ENSMUST00000224323 1779 ntBASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Eif5-212ENSMUST00000222375 3547 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Eif5-213ENSMUST00000222388 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Ggt1-201ENSMUST00000006508 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Emilin1-201ENSMUST00000031055 3852 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Prx-204ENSMUST00000125990 4298 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Prl8a2-202ENSMUST00000110363 922 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Nr5a1os-201ENSMUST00000146954 926 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Gm23757-201ENSMUST00000158353 100 ntBASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Gm25026-201ENSMUST00000175017 188 ntBASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Gm20854-201ENSMUST00000178889 1002 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Prl8a2-201ENSMUST00000018403 939 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Gm29541-201ENSMUST00000191351 678 ntBASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 2900064F13Rik-201ENSMUST00000202166 1008 ntBASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Gm45612-201ENSMUST00000211320 160 ntBASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Gm17330-201ENSMUST00000221047 165 ntBASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Tbl1xr1-211ENSMUST00000202747 4209 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Zic4-204ENSMUST00000172646 2535 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Bbs4-201ENSMUST00000026265 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Gm2822-201ENSMUST00000164299 2910 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Samd4-202ENSMUST00000100672 4165 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Ino80c-204ENSMUST00000153360 2498 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Atg7-210ENSMUST00000182793 2459 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 A730071L15Rik-201ENSMUST00000181545 1615 ntAPPRIS P1 BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Kcnh6-202ENSMUST00000106903 2816 ntTSL 5 BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Dcaf11-203ENSMUST00000117701 2311 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Madd-203ENSMUST00000075269 5756 ntAPPRIS ALT2 TSL 2 BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Tcf4-238ENSMUST00000201631 2660 ntTSL 5 BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Rbm4-206ENSMUST00000180248 2610 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Eif4a2-223ENSMUST00000168891 2203 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Samd11-204ENSMUST00000218788 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Kcnma1-212ENSMUST00000188285 4440 ntAPPRIS P4 TSL 1 (best) BASIC11.7□□□□□ -0.54
Upk3bl1Q9D701 Myo18a-221ENSMUST00000167856 6132 ntTSL 5 BASIC11.69□□□□□ -0.54
Upk3bl1Q9D701 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk3bl1Q9D701 Epha5-206ENSMUST00000113406 4606 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Upk3bl1Q9D701 Gfra1-201ENSMUST00000026076 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Upk3bl1Q9D701 Extl3-203ENSMUST00000225633 6013 ntAPPRIS P1 BASIC11.69□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 42 ms