Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Msgn1-201ENSMUST00000049877 613 ntAPPRIS P1 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Atg16l1-203ENSMUST00000113190 3102 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Kif14-201ENSMUST00000047817 8770 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Olfr1415-202ENSMUST00000204009 2815 ntAPPRIS P1 TSL 3 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Clec10a-209ENSMUST00000178945 2332 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Trmt44-201ENSMUST00000030980 3790 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Olfr742-203ENSMUST00000217437 2244 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Zap70-201ENSMUST00000027291 2245 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Ndst1-201ENSMUST00000169273 6070 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Selenot-201ENSMUST00000107924 3157 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Grm4-202ENSMUST00000118489 2976 ntTSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Ddx11-201ENSMUST00000163605 4149 ntAPPRIS P2 TSL 5 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Tacc2-201ENSMUST00000033141 3940 ntAPPRIS ALT2 TSL 5 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Erbb3-201ENSMUST00000082059 6016 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Chrna3-201ENSMUST00000034851 4358 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Nek4-203ENSMUST00000226551 4098 ntAPPRIS ALT2 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC8.54□□□□□ -1.04
Mrpl55Q9CZ83 Fbln2-202ENSMUST00000113498 4644 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Gmppb-202ENSMUST00000112295 2702 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Tctn2-207ENSMUST00000185820 2733 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Matn2-203ENSMUST00000226766 3252 ntBASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Vsir-203ENSMUST00000105460 4843 ntAPPRIS ALT1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Vsir-201ENSMUST00000020301 4846 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 C330018A13Rik-201ENSMUST00000127792 1599 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Pcdhga4-201ENSMUST00000194418 4727 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Ehmt1-205ENSMUST00000114432 4539 ntAPPRIS ALT2 TSL 5 BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Nagk-202ENSMUST00000113850 1918 ntTSL 5 BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Phldb1-213ENSMUST00000144251 3589 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Galntl6-208ENSMUST00000204128 5680 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Hipk4-201ENSMUST00000037134 2926 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Gm11478-201ENSMUST00000117851 599 ntBASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Gm14928-201ENSMUST00000120198 477 ntBASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Gm23984-201ENSMUST00000157139 203 ntBASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Ercc1-203ENSMUST00000160369 1175 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Gnb4-208ENSMUST00000193050 423 ntTSL 5 BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Agrp-202ENSMUST00000194091 734 ntAPPRIS P1 TSL 2 BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Gm19265-201ENSMUST00000201818 894 ntTSL 3 BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Gm33045-202ENSMUST00000210049 975 ntTSL 5 BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Gm7653-201ENSMUST00000214567 508 ntBASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 AC158987.1-201ENSMUST00000214586 961 ntTSL 5 BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Gm18027-201ENSMUST00000218947 619 ntBASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 AC139580.1-202ENSMUST00000223574 928 ntBASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Gm39822-201ENSMUST00000212253 2284 ntTSL 5 BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Shc1-201ENSMUST00000039110 3250 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 CT025624.1-201ENSMUST00000224007 2700 ntBASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Fen1-203ENSMUST00000142241 2152 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Ube3a-203ENSMUST00000200758 9856 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Khnyn-201ENSMUST00000022831 3898 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Wiz-201ENSMUST00000064694 2871 ntAPPRIS P4 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Gm26660-202ENSMUST00000223620 4112 ntBASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Prkd1-201ENSMUST00000002765 3653 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Gm17276-201ENSMUST00000180839 2782 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Eps15l1-203ENSMUST00000212121 2686 ntTSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Abcf2-201ENSMUST00000030795 2569 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Dner-201ENSMUST00000049126 3632 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC8.53□□□□□ -1.04
Mrpl55Q9CZ83 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.04
Mrpl55Q9CZ83 Rph3al-204ENSMUST00000121287 2199 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.04
Mrpl55Q9CZ83 Rit2-203ENSMUST00000153060 1806 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Mrpl55Q9CZ83 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.04
Mrpl55Q9CZ83 Bdh1-202ENSMUST00000115226 1496 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Mrpl55Q9CZ83 4732490B19Rik-201ENSMUST00000130373 2446 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Mrpl55Q9CZ83 Drc3-202ENSMUST00000094140 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Mrpl55Q9CZ83 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC8.52□□□□□ -1.05
Mrpl55Q9CZ83 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC8.52□□□□□ -1.05
Mrpl55Q9CZ83 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Mrpl55Q9CZ83 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Mrpl55Q9CZ83 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC8.52□□□□□ -1.05
Mrpl55Q9CZ83 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC8.52□□□□□ -1.05
Mrpl55Q9CZ83 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC8.52□□□□□ -1.05
Mrpl55Q9CZ83 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC8.52□□□□□ -1.05
Retrieved 100 of 76,532 protein–RNA pairs in 79.3 ms