Protein–RNA interactions for Protein: Q9CZ28

Snf8, Vacuolar-sorting protein SNF8, mousemouse

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Snf8Q9CZ28 Gm12132-201ENSMUST00000130945 1391 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Gas8-201ENSMUST00000093043 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Gm19817-201ENSMUST00000199764 2132 ntBASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Pabpc2-201ENSMUST00000063219 2586 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Coro2b-201ENSMUST00000048043 3610 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Snf8Q9CZ28 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Nsmce2-202ENSMUST00000168722 2679 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Mdm4-201ENSMUST00000067398 1914 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Myo6-204ENSMUST00000113268 7927 ntTSL 5 BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Dennd4b-201ENSMUST00000098914 5423 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Dnajc16-201ENSMUST00000038014 5969 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Gm9866-202ENSMUST00000182473 1882 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Psmd9-201ENSMUST00000100729 2597 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Tcp10b-202ENSMUST00000116666 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Wnt16-202ENSMUST00000128245 3285 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Gm5687-201ENSMUST00000118252 640 ntBASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Rapgef3os2-201ENSMUST00000124374 920 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Gm16215-201ENSMUST00000161990 637 ntBASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Smad7-204ENSMUST00000174411 769 ntTSL 5 BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Gm44397-201ENSMUST00000195950 113 ntBASIC13.17□□□□□ -0.3
Snf8Q9CZ28 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Gm42612-201ENSMUST00000197986 623 ntBASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Ighv8-10-201ENSMUST00000199579 358 ntBASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Gm43170-201ENSMUST00000199827 612 ntBASIC13.17□□□□□ -0.3
Snf8Q9CZ28 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Reep6-201ENSMUST00000040081 850 ntTSL 5 BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Arid5a-204ENSMUST00000115032 4640 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Spata33-208ENSMUST00000212892 2940 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Etv3-205ENSMUST00000170036 5127 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Gm43721-201ENSMUST00000199677 2313 ntBASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Cerk-203ENSMUST00000156546 2162 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Sncaip-209ENSMUST00000179625 2568 ntTSL 5 BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Gm17189-201ENSMUST00000163707 1630 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Wdr59-201ENSMUST00000034437 4896 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Snf8Q9CZ28 Asphd2-201ENSMUST00000031291 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Tcf12-218ENSMUST00000184783 3489 ntAPPRIS P3 TSL 5 BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Fam217b-201ENSMUST00000094251 4541 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Gtf2ird1-202ENSMUST00000074114 3330 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Gm26531-201ENSMUST00000181727 1967 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Gm45684-201ENSMUST00000210244 1571 ntBASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Sowahb-201ENSMUST00000061328 3900 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 A630014C17Rik-201ENSMUST00000150973 2984 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Oprm1-205ENSMUST00000078634 1695 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Pla2g15-204ENSMUST00000212963 2578 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 St6galnac4-204ENSMUST00000179989 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Daam2-202ENSMUST00000224595 1926 ntBASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Slc39a9-204ENSMUST00000217889 2155 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Srp54a-202ENSMUST00000220578 4498 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Ldha-ps-201ENSMUST00000119390 995 ntBASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Gm38411-201ENSMUST00000197971 941 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Gm18916-201ENSMUST00000198264 1246 ntBASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Gm44064-201ENSMUST00000204964 1087 ntBASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 AC156560.2-201ENSMUST00000221232 264 ntBASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Gm19220-201ENSMUST00000222682 803 ntBASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Olfr272-201ENSMUST00000051600 962 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Pnma3-201ENSMUST00000060418 3405 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Capn3-201ENSMUST00000028748 2606 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Snf8Q9CZ28 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Snf8Q9CZ28 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC13.15□□□□□ -0.3
Snf8Q9CZ28 Syne3-203ENSMUST00000109927 5263 ntAPPRIS ALT2 TSL 5 BASIC13.15□□□□□ -0.3
Snf8Q9CZ28 Tbc1d14-205ENSMUST00000136189 4436 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Snf8Q9CZ28 Gm4780-202ENSMUST00000215200 2644 ntBASIC13.15□□□□□ -0.3
Snf8Q9CZ28 Xpo1-201ENSMUST00000020538 5145 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Snf8Q9CZ28 Ldb3-201ENSMUST00000022327 5119 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Snf8Q9CZ28 Adcyap1r1-201ENSMUST00000070736 3695 ntAPPRIS P4 TSL 1 (best) BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms