Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Arhgap33-201ENSMUST00000044338 4280 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Gm26823-201ENSMUST00000181425 2361 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Ccdc71-201ENSMUST00000061209 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Pigm-201ENSMUST00000052455 7554 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Shroom1-202ENSMUST00000093114 2886 ntTSL 2 BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Smg8-201ENSMUST00000020801 3218 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Fads6-201ENSMUST00000056153 4951 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Gm12485-201ENSMUST00000119641 291 ntBASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Dkkl1-204ENSMUST00000210741 662 ntAPPRIS ALT2 TSL 2 BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Vsig2-204ENSMUST00000215271 891 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 AC153937.1-201ENSMUST00000218734 412 ntBASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Epo-201ENSMUST00000031723 715 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Madd-207ENSMUST00000111369 5582 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Gm10432-202ENSMUST00000223300 4791 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Lrch1-201ENSMUST00000088970 4694 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 P4ha1-203ENSMUST00000105466 2918 ntAPPRIS ALT1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Frmd3-201ENSMUST00000084474 4136 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 AC096628.2-201ENSMUST00000225443 1413 ntBASIC11.84□□□□□ -0.51
Trim13Q9CYB0 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Abcg5-201ENSMUST00000066175 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Gm40377-201ENSMUST00000204604 2015 ntBASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Prkar1b-203ENSMUST00000110890 2626 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Crat-201ENSMUST00000028207 3833 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Uchl1os-201ENSMUST00000152002 1685 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Ncoa3-202ENSMUST00000109252 5757 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Sec23b-201ENSMUST00000028916 2779 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Synpo-202ENSMUST00000115318 4479 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Gm15336-201ENSMUST00000128894 1571 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Robo3-201ENSMUST00000034643 4712 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Trim13Q9CYB0 Mlx-202ENSMUST00000107302 1826 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trim13Q9CYB0 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trim13Q9CYB0 Adra1a-206ENSMUST00000225182 2337 ntBASIC11.83□□□□□ -0.51
Trim13Q9CYB0 Ndufaf7-201ENSMUST00000024887 2303 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trim13Q9CYB0 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Gm3764-205ENSMUST00000181134 2203 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Rbak-202ENSMUST00000165318 3480 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Tor1aip1-202ENSMUST00000097527 4234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Cldn15-201ENSMUST00000001790 1850 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 BC067074-203ENSMUST00000136755 8274 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Wdr4-207ENSMUST00000171171 4153 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Hars2-201ENSMUST00000019287 2002 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Arvcf-204ENSMUST00000115613 4800 ntAPPRIS P3 TSL 5 BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Tdrd9-201ENSMUST00000079009 4809 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Gm4204-201ENSMUST00000110798 1231 ntBASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Apoc3-203ENSMUST00000121916 709 ntTSL 2 BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Auts2-212ENSMUST00000178555 309 ntBASIC11.83□□□□□ -0.52
Trim13Q9CYB0 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Bet1l-209ENSMUST00000211624 769 ntTSL 3 BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 AC161424.1-202ENSMUST00000213570 767 ntTSL 3 BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Gm7775-201ENSMUST00000218871 853 ntBASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Arhgef2-203ENSMUST00000170653 4238 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Gsdmcl2-203ENSMUST00000185431 1911 ntBASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Abcd1-202ENSMUST00000114461 2323 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Slc39a6-201ENSMUST00000070726 3882 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 CT025624.1-201ENSMUST00000224007 2700 ntBASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Lrfn5-201ENSMUST00000055815 4410 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 AC160411.1-201ENSMUST00000218544 4560 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Wdr18-201ENSMUST00000045247 3911 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Rnf25-202ENSMUST00000113721 1451 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trim13Q9CYB0 Gabpb1-206ENSMUST00000110425 4153 ntAPPRIS ALT1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Pcdhgc4-201ENSMUST00000066140 5024 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trim13Q9CYB0 Cplx1-201ENSMUST00000046892 2189 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.3 ms