Protein–RNA interactions for Protein: Q9CWU5

Khdc3, KH domain-containing protein 3, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc3Q9CWU5 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Gm10012-201ENSMUST00000078252 192 ntBASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Slc38a10-216ENSMUST00000179094 4052 ntAPPRIS ALT2 TSL 5 BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Larp4-202ENSMUST00000100206 6523 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Col8a1-201ENSMUST00000089332 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Aifm3-201ENSMUST00000023448 2688 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Alpk3-201ENSMUST00000107348 6369 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Stau1-204ENSMUST00000109238 2976 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 A830018L16Rik-202ENSMUST00000135014 6451 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Khdc3Q9CWU5 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 4933431E20Rik-209ENSMUST00000146337 1636 ntTSL 5 BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Ptprt-203ENSMUST00000109443 12112 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Llgl2-201ENSMUST00000103032 3551 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Dstyk-201ENSMUST00000045110 6282 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 AC117194.1-201ENSMUST00000224847 3002 ntBASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Hvcn1-201ENSMUST00000072602 2790 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Cngb1-201ENSMUST00000093268 1512 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Gm11814-201ENSMUST00000119515 929 ntBASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Gm11424-201ENSMUST00000121929 829 ntBASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Gm9061-201ENSMUST00000182707 1006 ntBASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Gm5035-201ENSMUST00000215581 927 ntBASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Dmrtc1c2-201ENSMUST00000087896 1255 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Rbbp5-207ENSMUST00000190997 2856 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Gm14608-201ENSMUST00000120030 1553 ntBASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Thpo-201ENSMUST00000076422 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Rbm14-201ENSMUST00000006625 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Gm15163-201ENSMUST00000120749 1302 ntBASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
Khdc3Q9CWU5 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Clcn3-201ENSMUST00000004430 4175 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Gprc5c-208ENSMUST00000177952 1809 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Srr-202ENSMUST00000108447 3138 ntTSL 5 BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Gtf2ird1-212ENSMUST00000200944 3133 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Krt17-201ENSMUST00000080893 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Padi2-201ENSMUST00000030765 4774 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Gm11592-201ENSMUST00000133160 637 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Gm24196-201ENSMUST00000179161 110 ntBASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Gm42906-201ENSMUST00000202365 408 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 S100a16-201ENSMUST00000098910 1123 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Tmem168-201ENSMUST00000031554 4587 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Snx33-201ENSMUST00000050916 4571 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Ntng1-208ENSMUST00000133268 5587 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Actn1-201ENSMUST00000021554 3734 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Slc6a20a-201ENSMUST00000040960 2732 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Myo18a-202ENSMUST00000092884 5117 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Fam83h-201ENSMUST00000060807 4502 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Irf1-202ENSMUST00000108920 2137 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Khdc3Q9CWU5 Klhdc7b-201ENSMUST00000166926 1818 ntAPPRIS P2 BASIC12.27□□□□□ -0.44
Khdc3Q9CWU5 Nin-204ENSMUST00000169074 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
Khdc3Q9CWU5 Foxb1-201ENSMUST00000071281 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Khdc3Q9CWU5 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.27□□□□□ -0.44
Khdc3Q9CWU5 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.27□□□□□ -0.44
Khdc3Q9CWU5 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Khdc3Q9CWU5 Kif2a-202ENSMUST00000117423 2023 ntTSL 5 BASIC12.27□□□□□ -0.44
Khdc3Q9CWU5 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.27□□□□□ -0.44
Khdc3Q9CWU5 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
Khdc3Q9CWU5 Nup98-201ENSMUST00000070165 4052 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Lrrc8c-201ENSMUST00000067924 6976 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
Khdc3Q9CWU5 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.27□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms