Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Gm43321-201ENSMUST00000198897 2409 ntBASIC12.77□□□□□ -0.37
Trim33Q99PP7 Mast4-207ENSMUST00000167058 10636 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim33Q99PP7 Rnf220-202ENSMUST00000094853 1675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trim33Q99PP7 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Epb41l2-204ENSMUST00000217929 3621 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Zfp853-202ENSMUST00000212355 2871 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Slc23a4-201ENSMUST00000044387 2175 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Vps4b-202ENSMUST00000112736 4539 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Grm2-201ENSMUST00000023959 4711 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Fastkd3-201ENSMUST00000051784 2421 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Mtmr2-201ENSMUST00000034396 3788 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Gm12390-201ENSMUST00000117897 397 ntBASIC12.76□□□□□ -0.37
Trim33Q99PP7 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim33Q99PP7 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim33Q99PP7 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC12.76□□□□□ -0.37
Trim33Q99PP7 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Ccdc167-202ENSMUST00000128751 1365 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Gm45684-201ENSMUST00000210244 1571 ntBASIC12.76□□□□□ -0.37
Trim33Q99PP7 Slc35g3-201ENSMUST00000102586 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Gjb5-201ENSMUST00000046498 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Pcnx-201ENSMUST00000021567 12139 ntAPPRIS P2 TSL 2 BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Zbtb7b-202ENSMUST00000107432 3639 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Agrn-201ENSMUST00000071248 4831 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Urgcp-202ENSMUST00000093362 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim33Q99PP7 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Dnm1-202ENSMUST00000091089 3764 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Eif1ax-201ENSMUST00000087143 5172 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Dctn6-202ENSMUST00000117243 962 ntTSL 3 BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Ice2-203ENSMUST00000117610 800 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Riox2-203ENSMUST00000120674 1753 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Ndufaf2-201ENSMUST00000163558 678 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Mhrt-201ENSMUST00000181782 828 ntTSL 2 BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Gm27331-201ENSMUST00000183705 60 ntBASIC12.75□□□□□ -0.37
Trim33Q99PP7 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Gm6458-201ENSMUST00000211573 635 ntBASIC12.75□□□□□ -0.37
Trim33Q99PP7 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Slc35d2-202ENSMUST00000220792 917 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Zscan30-202ENSMUST00000224144 1458 ntBASIC12.75□□□□□ -0.37
Trim33Q99PP7 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Nup205-201ENSMUST00000043815 6412 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Gps2-201ENSMUST00000057884 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Ptgir-201ENSMUST00000086101 2725 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Omp-201ENSMUST00000098281 2144 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Dag1-204ENSMUST00000191899 5662 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Msh6-201ENSMUST00000005503 4254 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Cdc37l1-207ENSMUST00000225210 4163 ntAPPRIS ALT2 BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Gtf2ird1-224ENSMUST00000202280 3052 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim33Q99PP7 Tat-201ENSMUST00000001720 2375 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Tfdp2-203ENSMUST00000165768 2212 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Apobec1-201ENSMUST00000112585 2127 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Cpa1-201ENSMUST00000031806 1583 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Gm38049-201ENSMUST00000195698 1372 ntBASIC12.74□□□□□ -0.37
Trim33Q99PP7 Trp53i11-202ENSMUST00000111266 2703 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Rtn4-203ENSMUST00000102841 4060 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Fzd4-201ENSMUST00000058755 6720 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim33Q99PP7 Rpl39-201ENSMUST00000115231 612 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 61.6 ms