Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Car10-201ENSMUST00000042943 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Map3k2-201ENSMUST00000096575 10791 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Gm16853-201ENSMUST00000181812 1986 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Gcdh-201ENSMUST00000003907 2167 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Tm9sf2-201ENSMUST00000026624 3107 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Arrb1-201ENSMUST00000032995 3715 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Slc25a40-201ENSMUST00000066921 2784 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Gm4858-202ENSMUST00000194595 1810 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Lmna-201ENSMUST00000029699 3156 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Wdcp-205ENSMUST00000220215 2202 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Slc13a2-201ENSMUST00000001122 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 S1pr1-201ENSMUST00000055676 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Dynlt1b-201ENSMUST00000179569 768 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 AC192088.1-201ENSMUST00000227561 301 ntBASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Hcfc1r1-201ENSMUST00000024697 946 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Aip-201ENSMUST00000025767 1261 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 E430018J23Rik-203ENSMUST00000165495 3324 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Rab11a-208ENSMUST00000172298 2336 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 St6galnac6-202ENSMUST00000081879 2345 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Rgs20-202ENSMUST00000118000 2125 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Rps7-ps2-201ENSMUST00000219719 1347 ntBASIC12.56□□□□□ -0.4
Trim8Q99PJ2 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Cyth4-201ENSMUST00000043069 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Gm42890-202ENSMUST00000167642 2566 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Hspa9-201ENSMUST00000025217 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Gm18630-201ENSMUST00000222109 1397 ntBASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Fgfr1op-201ENSMUST00000024636 3077 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Trim8Q99PJ2 Ddx10-201ENSMUST00000065630 3128 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Ints1-210ENSMUST00000200393 7070 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 4933439K11Rik-203ENSMUST00000169111 1869 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Thoc5-202ENSMUST00000101615 2116 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Kif2c-201ENSMUST00000065896 2842 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Hnrnpr-201ENSMUST00000084219 2647 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Cyp2a4-201ENSMUST00000098657 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 E230029C05Rik-205ENSMUST00000208362 2444 ntTSL 2 BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Gm22189-201ENSMUST00000103822 86 ntBASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Nat8f1-201ENSMUST00000161198 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Gm31326-201ENSMUST00000191856 1048 ntBASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Gm42612-201ENSMUST00000197986 623 ntBASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Gm43170-201ENSMUST00000199827 612 ntBASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Cpped1-202ENSMUST00000096272 2663 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Itfg2-203ENSMUST00000142615 3191 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Zfp125-201ENSMUST00000079237 2488 ntBASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Nelfcd-202ENSMUST00000109075 2279 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Creb3l2-201ENSMUST00000041093 7082 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Gm9530-201ENSMUST00000181160 3281 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Ppp1r18-203ENSMUST00000127442 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Usp5-202ENSMUST00000122110 3076 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Slc16a12-201ENSMUST00000009522 4051 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Mgme1-202ENSMUST00000110027 2359 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 4631405K08Rik-201ENSMUST00000180420 2112 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Cd200r1-201ENSMUST00000057488 1892 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Trim8Q99PJ2 Dgcr2-203ENSMUST00000117082 2987 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Gm43666-201ENSMUST00000197116 2989 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Gm27177-202ENSMUST00000183514 2703 ntBASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Sptbn2-201ENSMUST00000008991 8251 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Abhd6-203ENSMUST00000225234 1958 ntBASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Arhgef15-203ENSMUST00000108671 4372 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Gm7049-201ENSMUST00000223520 1712 ntBASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Ppp1r9b-202ENSMUST00000107748 3095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Usp24-201ENSMUST00000094933 10575 ntAPPRIS P2 TSL 5 BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Gm44094-201ENSMUST00000204703 2030 ntBASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Cisd2-201ENSMUST00000029815 3361 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Pik3cd-203ENSMUST00000105689 3132 ntAPPRIS ALT1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Kpna7-203ENSMUST00000116454 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Zfp961-202ENSMUST00000131237 2689 ntAPPRIS ALT2 TSL 3 BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Pprc1-201ENSMUST00000062322 5205 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
Trim8Q99PJ2 Gm24694-201ENSMUST00000180054 110 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 58.6 ms