Protein–RNA interactions for Protein: Q99NI3

Gtf2ird2, General transcription factor II-I repeat domain-containing protein 2, mousemouse

Predictions only

Length 936 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf2ird2Q99NI3 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Gtf2ird2Q99NI3 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 AC122314.1-201ENSMUST00000223056 2239 ntBASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Pianp-207ENSMUST00000162170 2053 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Gm44775-201ENSMUST00000207266 1456 ntBASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Mirg-202ENSMUST00000181543 1300 ntTSL 5 BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Ncald-211ENSMUST00000168992 3538 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Nup88-203ENSMUST00000108531 2453 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Cdc14a-202ENSMUST00000106491 4292 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Mir1247-201ENSMUST00000116706 82 ntBASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Gm6023-201ENSMUST00000118217 606 ntBASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Gm14921-201ENSMUST00000118643 908 ntBASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Gm24548-201ENSMUST00000158650 108 ntBASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Gm23363-201ENSMUST00000175024 79 ntBASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Gm9823-201ENSMUST00000051212 327 ntBASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 CT009713.10-201ENSMUST00000225013 1986 ntBASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 4930458D05Rik-201ENSMUST00000142871 3055 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Gm38157-201ENSMUST00000194178 1698 ntBASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Gm18222-201ENSMUST00000202416 1387 ntBASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Akp-ps1-201ENSMUST00000188050 1600 ntBASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Tubb2a-201ENSMUST00000056427 1610 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Gtf2ird2Q99NI3 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Zfp94-201ENSMUST00000032673 2529 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Egfl7-201ENSMUST00000100290 1348 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Ccdc85a-204ENSMUST00000109502 5220 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Armcx1-201ENSMUST00000035748 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Mib1-205ENSMUST00000165555 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Rims1-205ENSMUST00000097811 6446 ntAPPRIS P5 TSL 5 BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Naga-201ENSMUST00000023088 1913 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Elovl1-203ENSMUST00000102673 1248 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 E130114P18Rik-202ENSMUST00000107068 1132 ntAPPRIS P5 TSL 3 BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 2810039B14Rik-206ENSMUST00000185040 1113 ntBASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Gm43403-202ENSMUST00000198830 370 ntTSL 3 BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Cyb5d1-201ENSMUST00000051620 753 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Gm11559-201ENSMUST00000092694 1096 ntAPPRIS P1 BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Dppa4-202ENSMUST00000096045 1534 ntAPPRIS P4 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Prkcd-202ENSMUST00000112202 2005 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Il7-205ENSMUST00000194279 4858 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Igsf23-204ENSMUST00000208974 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Gtf2ird2Q99NI3 Bbof1-201ENSMUST00000081828 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2ird2Q99NI3 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2ird2Q99NI3 Gm8798-201ENSMUST00000211877 1661 ntBASIC13.15□□□□□ -0.3
Gtf2ird2Q99NI3 Pdcd6ip-202ENSMUST00000111861 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2ird2Q99NI3 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2ird2Q99NI3 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2ird2Q99NI3 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2ird2Q99NI3 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2ird2Q99NI3 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2ird2Q99NI3 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.15□□□□□ -0.3
Gtf2ird2Q99NI3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Gtf2ird2Q99NI3 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC13.15□□□□□ -0.3
Gtf2ird2Q99NI3 Gm16302-201ENSMUST00000159268 428 ntTSL 3 BASIC13.15□□□□□ -0.3
Gtf2ird2Q99NI3 AI480526-203ENSMUST00000160099 1017 ntTSL 2 BASIC13.15□□□□□ -0.3
Gtf2ird2Q99NI3 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Gtf2ird2Q99NI3 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC13.15□□□□□ -0.3
Gtf2ird2Q99NI3 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 59.9 ms