Protein–RNA interactions for Protein: Q99M85

Scrt1, Transcriptional repressor scratch 1, mousemouse

Predictions only

Length 348 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scrt1Q99M85 Mpp3-204ENSMUST00000107168 3094 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Dnajb4-204ENSMUST00000144950 2459 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Gm45242-201ENSMUST00000210666 2129 ntBASIC11.26□□□□□ -0.61
Scrt1Q99M85 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC11.26□□□□□ -0.61
Scrt1Q99M85 Dmac2-201ENSMUST00000077338 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Fbp1-201ENSMUST00000092888 1479 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Gm20700-201ENSMUST00000176749 2206 ntTSL 3 BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Hoxb9-202ENSMUST00000174042 2269 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Slc38a10-204ENSMUST00000103018 4578 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 7420426K07Rik-201ENSMUST00000098460 1504 ntAPPRIS P1 BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Ecm1-202ENSMUST00000117507 1900 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Nmral1-204ENSMUST00000120056 2440 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Alx1-201ENSMUST00000040859 2493 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Hp1bp3-201ENSMUST00000030541 3311 ntAPPRIS P3 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Kcnj3-203ENSMUST00000112633 1679 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Gm12217-201ENSMUST00000118858 696 ntBASIC11.25□□□□□ -0.61
Scrt1Q99M85 Gm6447-201ENSMUST00000118905 835 ntBASIC11.25□□□□□ -0.61
Scrt1Q99M85 Gm11222-201ENSMUST00000119005 738 ntBASIC11.25□□□□□ -0.61
Scrt1Q99M85 Gm12566-201ENSMUST00000121479 359 ntBASIC11.25□□□□□ -0.61
Scrt1Q99M85 Gm15046-201ENSMUST00000130153 408 ntTSL 3 BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Gm15979-201ENSMUST00000149741 590 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Gm26185-201ENSMUST00000157692 266 ntBASIC11.25□□□□□ -0.61
Scrt1Q99M85 Rps13-201ENSMUST00000170953 589 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Gm8738-201ENSMUST00000172606 329 ntBASIC11.25□□□□□ -0.61
Scrt1Q99M85 Gm43947-201ENSMUST00000203019 959 ntBASIC11.25□□□□□ -0.61
Scrt1Q99M85 Gm44967-201ENSMUST00000207047 631 ntBASIC11.25□□□□□ -0.61
Scrt1Q99M85 Bet1l-207ENSMUST00000211527 298 ntTSL 5 BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 AC173210.1-201ENSMUST00000222341 1131 ntBASIC11.25□□□□□ -0.61
Scrt1Q99M85 Lypd2-201ENSMUST00000023260 513 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Nit2-201ENSMUST00000023432 1280 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Psma1-201ENSMUST00000033008 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Atp6ap1-202ENSMUST00000114171 2157 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Dmtn-208ENSMUST00000228009 2643 ntAPPRIS P2 BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Col26a1-202ENSMUST00000111103 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC11.25□□□□□ -0.61
Scrt1Q99M85 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC11.25□□□□□ -0.61
Scrt1Q99M85 1500009C09Rik-201ENSMUST00000136948 1526 ntAPPRIS P5 TSL 3 BASIC11.25□□□□□ -0.61
Scrt1Q99M85 Cd27-201ENSMUST00000032486 1559 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Spo11-203ENSMUST00000109126 1625 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Prdx2-203ENSMUST00000109734 1612 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Capn5-202ENSMUST00000107112 2232 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Slc39a8-206ENSMUST00000180196 3383 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Diaph3-202ENSMUST00000168889 4582 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Diaph3-201ENSMUST00000022599 4582 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Gstcd-202ENSMUST00000080583 2394 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Zfpm2-201ENSMUST00000053467 4974 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Spsb1-202ENSMUST00000105684 1002 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Cntf-201ENSMUST00000112933 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Gm4909-201ENSMUST00000118749 794 ntBASIC11.24□□□□□ -0.61
Scrt1Q99M85 Gm10863-201ENSMUST00000130745 438 ntTSL 3 BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Aamdc-210ENSMUST00000146605 642 ntTSL 3 BASIC11.24□□□□□ -0.61
Scrt1Q99M85 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Gm5523-201ENSMUST00000180415 997 ntBASIC11.24□□□□□ -0.61
Scrt1Q99M85 Gm2445-201ENSMUST00000182798 989 ntBASIC11.24□□□□□ -0.61
Scrt1Q99M85 Gstp-ps-201ENSMUST00000195526 631 ntBASIC11.24□□□□□ -0.61
Scrt1Q99M85 Gm31651-201ENSMUST00000198864 560 ntTSL 3 BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Ube2a-202ENSMUST00000200835 911 ntTSL 5 BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Gm42800-201ENSMUST00000202494 733 ntTSL 5 BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Ube2a-209ENSMUST00000202991 715 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Gm18584-201ENSMUST00000203098 964 ntBASIC11.24□□□□□ -0.61
Scrt1Q99M85 1700112L15Rik-201ENSMUST00000212067 510 ntBASIC11.24□□□□□ -0.61
Scrt1Q99M85 Ift43-205ENSMUST00000222821 783 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Olfr983-201ENSMUST00000050996 1050 ntTSL 2 BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Vmn1r65-201ENSMUST00000086338 2682 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Apaf1-207ENSMUST00000161987 2710 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 BC039966-201ENSMUST00000141582 1371 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Gm20683-201ENSMUST00000176751 2790 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC11.24□□□□□ -0.61
Scrt1Q99M85 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.24□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 66.7 ms