Protein–RNA interactions for Protein: Q99LU0

Chmp1b1, Charged multivesicular body protein 1b-1, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp1b1Q99LU0 Kcnab2-203ENSMUST00000159186 1552 ntTSL 5 BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Dcun1d3-206ENSMUST00000207233 2917 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Tjp3-205ENSMUST00000219479 2901 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Pcdhgb2-202ENSMUST00000195112 4661 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Chmp1b1Q99LU0 Mgll-201ENSMUST00000089449 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Espn-201ENSMUST00000030785 3406 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Tcf4-204ENSMUST00000114978 2437 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Slc25a42-201ENSMUST00000063788 3081 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Kcnv2-201ENSMUST00000056708 5108 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Gm15544-201ENSMUST00000118776 1531 ntBASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Iba57-201ENSMUST00000054523 4021 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Phf21a-209ENSMUST00000111297 6188 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Phf21a-201ENSMUST00000044036 6187 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Dhx30-212ENSMUST00000197928 4441 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Zfp12-203ENSMUST00000077485 4294 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Flrt1-201ENSMUST00000113383 5859 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Kcnt1-212ENSMUST00000197917 3711 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Prss45-201ENSMUST00000011391 1232 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Otx2-201ENSMUST00000118578 2144 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Gm15824-201ENSMUST00000119516 955 ntBASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 4930594M17Rik-201ENSMUST00000181204 1033 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 4930478K11Rik-201ENSMUST00000181875 715 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 AC132467.2-202ENSMUST00000227726 559 ntBASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Ap2s1-201ENSMUST00000086112 836 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Triml2-203ENSMUST00000209872 1395 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Nckipsd-201ENSMUST00000035218 3360 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Ly75-202ENSMUST00000112533 6901 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Fbxl5-211ENSMUST00000196483 2814 ntAPPRIS ALT1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 AC127597.1-201ENSMUST00000225697 5711 ntBASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Vmn1r193-202ENSMUST00000227457 6429 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Lgals12-203ENSMUST00000159983 2470 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Rab11fip3-203ENSMUST00000122103 5015 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Chmp1b1Q99LU0 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Ankrd35-201ENSMUST00000048427 4052 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Foxd4-201ENSMUST00000058600 2345 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Bcl6-201ENSMUST00000023151 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Nkd2-201ENSMUST00000022051 4016 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Pdlim5-201ENSMUST00000029941 5016 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Sema4f-201ENSMUST00000000641 4086 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Gm14149-201ENSMUST00000123048 1853 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Gm4984-201ENSMUST00000115987 360 ntBASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Gm14350-201ENSMUST00000116642 640 ntBASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Gm27892-201ENSMUST00000185017 106 ntBASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Gm37748-201ENSMUST00000194379 1140 ntBASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Gm43433-201ENSMUST00000196573 481 ntBASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 1700067P10Rik-201ENSMUST00000022028 794 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Kxd1-201ENSMUST00000093456 1216 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Aff3-203ENSMUST00000095027 5857 ntAPPRIS P2 TSL 5 BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Lin28a-201ENSMUST00000051674 3505 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Slc29a2-201ENSMUST00000025826 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Hyal1-204ENSMUST00000144392 1332 ntTSL 5 BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Chmp1b1Q99LU0 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 68.8 ms