Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm45332-201ENSMUST00000210508 1949 ntTSL 5 BASIC13.47□□□□□ -0.25
Clp1Q99LI9 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Gm43134-201ENSMUST00000199434 1886 ntBASIC13.47□□□□□ -0.25
Clp1Q99LI9 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Adgrv1-206ENSMUST00000128120 1591 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Gm23949-201ENSMUST00000104027 127 ntBASIC13.47□□□□□ -0.25
Clp1Q99LI9 Ndufs5-203ENSMUST00000106207 680 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Dixdc1-204ENSMUST00000118707 989 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Gm12678-201ENSMUST00000154177 692 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Gm5616-201ENSMUST00000165252 384 ntBASIC13.47□□□□□ -0.25
Clp1Q99LI9 Aif1-203ENSMUST00000172693 842 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Gm8741-201ENSMUST00000174736 384 ntBASIC13.47□□□□□ -0.25
Clp1Q99LI9 Gm8494-201ENSMUST00000178171 1233 ntBASIC13.47□□□□□ -0.25
Clp1Q99LI9 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Gm9555-201ENSMUST00000200908 583 ntBASIC13.47□□□□□ -0.25
Clp1Q99LI9 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Ndufs5-201ENSMUST00000030401 525 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Nudt7-201ENSMUST00000066514 935 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Rbm11-203ENSMUST00000114253 2699 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Pbld1-202ENSMUST00000178684 2404 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Clp1Q99LI9 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clp1Q99LI9 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC13.46□□□□□ -0.25
Clp1Q99LI9 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.46□□□□□ -0.25
Clp1Q99LI9 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC13.46□□□□□ -0.25
Clp1Q99LI9 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clp1Q99LI9 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC13.46□□□□□ -0.25
Clp1Q99LI9 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clp1Q99LI9 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clp1Q99LI9 Ppm1g-201ENSMUST00000031032 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clp1Q99LI9 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clp1Q99LI9 Gm16741-201ENSMUST00000145085 1818 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Clp1Q99LI9 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Clp1Q99LI9 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clp1Q99LI9 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clp1Q99LI9 Crem-233ENSMUST00000154135 2530 ntTSL 5 BASIC13.46□□□□□ -0.25
Clp1Q99LI9 Gm44094-201ENSMUST00000204703 2030 ntBASIC13.46□□□□□ -0.25
Clp1Q99LI9 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Clp1Q99LI9 Btrc-201ENSMUST00000065601 2978 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clp1Q99LI9 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clp1Q99LI9 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clp1Q99LI9 Fut8-201ENSMUST00000062804 3358 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clp1Q99LI9 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clp1Q99LI9 Trav13-1-201ENSMUST00000103651 331 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Clp1Q99LI9 Gm13813-201ENSMUST00000120998 787 ntBASIC13.46□□□□□ -0.25
Clp1Q99LI9 Gm5863-201ENSMUST00000121760 1008 ntBASIC13.46□□□□□ -0.25
Clp1Q99LI9 Gm27627-201ENSMUST00000183644 150 ntBASIC13.46□□□□□ -0.25
Clp1Q99LI9 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC13.46□□□□□ -0.25
Clp1Q99LI9 D9Wsu149-201ENSMUST00000214169 594 ntBASIC13.46□□□□□ -0.25
Clp1Q99LI9 1700027J07Rik-202ENSMUST00000215747 1060 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Clp1Q99LI9 Ufc1-201ENSMUST00000080001 1007 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clp1Q99LI9 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Clp1Q99LI9 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Clp1Q99LI9 Barhl2-201ENSMUST00000086795 2314 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Clp1Q99LI9 Abhd6-201ENSMUST00000026313 1401 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Clp1Q99LI9 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Clp1Q99LI9 Armc7-201ENSMUST00000035240 2260 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Clp1Q99LI9 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.46□□□□□ -0.26
Clp1Q99LI9 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Clp1Q99LI9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Txndc12-201ENSMUST00000030296 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Gtf3c5-201ENSMUST00000028157 2739 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Adi1-201ENSMUST00000020957 1652 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Tmem159-201ENSMUST00000033210 1484 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Ighv5-2-201ENSMUST00000103442 350 ntAPPRIS ALT2 BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Olfr239-201ENSMUST00000112165 948 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Gm13045-201ENSMUST00000119019 712 ntBASIC13.45□□□□□ -0.26
Clp1Q99LI9 Gm11450-201ENSMUST00000121144 333 ntBASIC13.45□□□□□ -0.26
Clp1Q99LI9 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Crnde-207ENSMUST00000180102 732 ntTSL 3 BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Nr1h2-ps-201ENSMUST00000183844 478 ntBASIC13.45□□□□□ -0.26
Clp1Q99LI9 2010110E17Rik-201ENSMUST00000184161 879 ntBASIC13.45□□□□□ -0.26
Clp1Q99LI9 1700119H24Rik-201ENSMUST00000187558 588 ntTSL 5 BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Gm9230-201ENSMUST00000188228 532 ntBASIC13.45□□□□□ -0.26
Clp1Q99LI9 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 5330413P13Rik-205ENSMUST00000210961 913 ntTSL 5 BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Elovl1-202ENSMUST00000067896 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Olfr482-202ENSMUST00000217304 2612 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Adam33-202ENSMUST00000110232 3165 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Clp1Q99LI9 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms