Protein–RNA interactions for Protein: Q922J3

Clip1, CAP-Gly domain-containing linker protein 1, mousemouse

Predictions only

Length 1,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip1Q922J3 AC025913.2-202ENSMUST00000219248 605 ntTSL 5 BASIC19.91■□□□□ 0.78
Clip1Q922J3 AC131330.1-201ENSMUST00000227814 1015 ntBASIC19.91■□□□□ 0.78
Clip1Q922J3 Asphd1-201ENSMUST00000052937 730 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip1Q922J3 Ap2a1-204ENSMUST00000167930 3376 ntTSL 5 BASIC19.91■□□□□ 0.78
Clip1Q922J3 Abo-202ENSMUST00000114045 1811 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Clip1Q922J3 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip1Q922J3 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip1Q922J3 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip1Q922J3 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC19.91■□□□□ 0.78
Clip1Q922J3 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip1Q922J3 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC19.91■□□□□ 0.78
Clip1Q922J3 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Clip1Q922J3 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clip1Q922J3 Ahcyl2-205ENSMUST00000125911 2039 ntTSL 5 BASIC19.9■□□□□ 0.78
Clip1Q922J3 Slc25a25-204ENSMUST00000113308 2643 ntTSL 5 BASIC19.9■□□□□ 0.78
Clip1Q922J3 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
Clip1Q922J3 Dynlrb1-202ENSMUST00000109682 684 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clip1Q922J3 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC19.9■□□□□ 0.78
Clip1Q922J3 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC19.9■□□□□ 0.78
Clip1Q922J3 Gm17040-202ENSMUST00000170597 889 ntBASIC19.9■□□□□ 0.78
Clip1Q922J3 Rab13-201ENSMUST00000065418 1107 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clip1Q922J3 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clip1Q922J3 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC19.9■□□□□ 0.78
Clip1Q922J3 Cpped1-201ENSMUST00000073371 1922 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clip1Q922J3 Fam170a-201ENSMUST00000039121 1342 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clip1Q922J3 Pphln1-204ENSMUST00000165935 3473 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clip1Q922J3 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
Clip1Q922J3 Slc6a9-209ENSMUST00000163288 2107 ntTSL 5 BASIC19.9■□□□□ 0.78
Clip1Q922J3 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Clip1Q922J3 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Clip1Q922J3 Sars-202ENSMUST00000102625 1866 ntTSL 1 (best) BASIC19.89■□□□□ 0.78
Clip1Q922J3 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
Clip1Q922J3 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Clip1Q922J3 Ficd-201ENSMUST00000065698 3133 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clip1Q922J3 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC19.89■□□□□ 0.77
Clip1Q922J3 Zmynd15-201ENSMUST00000039093 2804 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clip1Q922J3 Tcf4-249ENSMUST00000202435 2427 ntTSL 5 BASIC19.89■□□□□ 0.77
Clip1Q922J3 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clip1Q922J3 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clip1Q922J3 Gltp-202ENSMUST00000112212 799 ntTSL 5 BASIC19.89■□□□□ 0.77
Clip1Q922J3 Gm12380-201ENSMUST00000119012 544 ntBASIC19.89■□□□□ 0.77
Clip1Q922J3 Gm11331-201ENSMUST00000119764 288 ntBASIC19.89■□□□□ 0.77
Clip1Q922J3 Gm11985-201ENSMUST00000122910 1007 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Clip1Q922J3 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Clip1Q922J3 Gm13832-202ENSMUST00000151159 370 ntTSL 3 BASIC19.89■□□□□ 0.77
Clip1Q922J3 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
Clip1Q922J3 Hax1-205ENSMUST00000197767 1092 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
Clip1Q922J3 Gm35082-202ENSMUST00000208164 525 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Clip1Q922J3 Gpc2-205ENSMUST00000161827 2586 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clip1Q922J3 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
Clip1Q922J3 Hlf-201ENSMUST00000004051 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clip1Q922J3 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clip1Q922J3 Cyp2b10-201ENSMUST00000005477 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clip1Q922J3 Gm28496-202ENSMUST00000137742 2752 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Clip1Q922J3 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Clip1Q922J3 Cab39-201ENSMUST00000097666 2369 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Clip1Q922J3 Cdk15-201ENSMUST00000114248 1477 ntAPPRIS P2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clip1Q922J3 Cd79a-201ENSMUST00000003469 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clip1Q922J3 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Clip1Q922J3 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clip1Q922J3 Olfr157-202ENSMUST00000215442 1766 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Clip1Q922J3 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip1Q922J3 Hdac10-201ENSMUST00000082197 2412 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip1Q922J3 AC238940.1-201ENSMUST00000225106 1858 ntBASIC19.88■□□□□ 0.77
Clip1Q922J3 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
Clip1Q922J3 Gm14263-201ENSMUST00000117955 746 ntBASIC19.88■□□□□ 0.77
Clip1Q922J3 Gm13563-201ENSMUST00000125518 643 ntTSL 3 BASIC19.88■□□□□ 0.77
Clip1Q922J3 Retn-201ENSMUST00000012849 874 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip1Q922J3 AC107638.1-201ENSMUST00000213690 1061 ntBASIC19.88■□□□□ 0.77
Clip1Q922J3 AC153974.2-201ENSMUST00000218577 1025 ntBASIC19.88■□□□□ 0.77
Clip1Q922J3 Abracl-204ENSMUST00000220110 768 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip1Q922J3 AC159205.5-202ENSMUST00000224849 386 ntBASIC19.88■□□□□ 0.77
Clip1Q922J3 Mlana-201ENSMUST00000025719 623 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip1Q922J3 Cbx1-202ENSMUST00000079702 912 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clip1Q922J3 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clip1Q922J3 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip1Q922J3 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip1Q922J3 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip1Q922J3 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC19.88■□□□□ 0.77
Clip1Q922J3 Arid4b-202ENSMUST00000110533 3020 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
Clip1Q922J3 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip1Q922J3 Micu1-201ENSMUST00000020311 2336 ntTSL 5 BASIC19.88■□□□□ 0.77
Clip1Q922J3 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip1Q922J3 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip1Q922J3 Sept10-201ENSMUST00000165971 2532 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip1Q922J3 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip1Q922J3 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC19.88■□□□□ 0.77
Clip1Q922J3 Zmym3-205ENSMUST00000119699 1750 ntTSL 5 BASIC19.88■□□□□ 0.77
Clip1Q922J3 Sp4-203ENSMUST00000222314 2677 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
Clip1Q922J3 Pex19-201ENSMUST00000075895 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clip1Q922J3 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Clip1Q922J3 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clip1Q922J3 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Clip1Q922J3 Gm5616-201ENSMUST00000165252 384 ntBASIC19.87■□□□□ 0.77
Clip1Q922J3 Gm8741-201ENSMUST00000174736 384 ntBASIC19.87■□□□□ 0.77
Clip1Q922J3 Gm43378-201ENSMUST00000199336 582 ntBASIC19.87■□□□□ 0.77
Clip1Q922J3 Rpl29-201ENSMUST00000059802 710 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Clip1Q922J3 Taar7e-201ENSMUST00000092656 1077 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Clip1Q922J3 C530008M17Rik-203ENSMUST00000120818 1378 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Clip1Q922J3 Gm5580-201ENSMUST00000122096 1362 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms