Protein–RNA interactions for Protein: Q91XZ4

Pcdhb6, Protocadherin beta-6, mousemouse

Predictions only

Length 772 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb6Q91XZ4 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 U2af1l4-206ENSMUST00000163654 781 ntTSL 2 BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 U2af1l4-221ENSMUST00000167361 860 ntTSL 2 BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Psme1-202ENSMUST00000172738 681 ntTSL 5 BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Gm26854-201ENSMUST00000180418 705 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Gm10371-202ENSMUST00000228010 1081 ntBASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Vipr1-201ENSMUST00000035115 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Gm7114-201ENSMUST00000190159 1789 ntBASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Golim4-202ENSMUST00000117242 4551 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Cdk5rap1-203ENSMUST00000109731 2160 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Gm42416-201ENSMUST00000115661 2856 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Klhl26-201ENSMUST00000066597 2991 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Mtm1-201ENSMUST00000025391 3286 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Pcdhb6Q91XZ4 Gm5620-201ENSMUST00000077991 1348 ntBASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Gm43463-201ENSMUST00000195967 1803 ntBASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Alg14-201ENSMUST00000039442 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Recql-201ENSMUST00000032370 2112 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Nrg1-210ENSMUST00000208488 2403 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Slc35d1-203ENSMUST00000150285 4242 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Zer1-202ENSMUST00000113677 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Ctps2-206ENSMUST00000112303 3289 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Ccng2-202ENSMUST00000121127 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Prex1-203ENSMUST00000109246 2386 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Cdk7-201ENSMUST00000091299 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Gm15897-201ENSMUST00000117770 1486 ntBASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 R3hdml-201ENSMUST00000109416 1094 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Adamtsl1-204ENSMUST00000120678 977 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Gm6266-201ENSMUST00000203844 806 ntBASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 AC130829.1-201ENSMUST00000221548 494 ntBASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Tatdn3-201ENSMUST00000027945 1196 ntAPPRIS ALT2 TSL 3 BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 D430019H16Rik-201ENSMUST00000178224 5786 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 9930014A18Rik-201ENSMUST00000180730 3074 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Olfr56-204ENSMUST00000203149 1808 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Duoxa1-202ENSMUST00000110537 1506 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Fmo1-201ENSMUST00000046049 2388 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Kcnt1-204ENSMUST00000114176 4166 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Pcdhb6Q91XZ4 Mast1-202ENSMUST00000119820 2078 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Fam198a-202ENSMUST00000213773 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Trim29-201ENSMUST00000034511 2735 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Bin3-201ENSMUST00000022680 1767 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Slc26a5-201ENSMUST00000030878 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Tmem39a-201ENSMUST00000002924 2871 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Pex2-204ENSMUST00000165309 2038 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Kcnk2-202ENSMUST00000110920 3572 ntAPPRIS ALT1 TSL 5 BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Sfpq-201ENSMUST00000030623 3465 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Pole3-201ENSMUST00000030091 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Lsm2-202ENSMUST00000114011 840 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Gm4984-201ENSMUST00000115987 360 ntBASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Cdkn1a-202ENSMUST00000119901 748 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Syce3-202ENSMUST00000167959 480 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Hectd2-208ENSMUST00000169036 3842 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 6430590A07Rik-201ENSMUST00000181813 1032 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Gm28411-201ENSMUST00000189864 341 ntTSL 3 BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 AC165260.3-202ENSMUST00000224550 1031 ntBASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 AC069562.3-201ENSMUST00000225387 587 ntBASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 H2-Oa-201ENSMUST00000025192 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Pcdhb6Q91XZ4 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 45.2 ms