Protein–RNA interactions for Protein: Q91XY4

Pcdhga4, Protocadherin gamma-A4, mousemouse

Predictions only

Length 930 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga4Q91XY4 Gm28386-201ENSMUST00000189147 1849 ntBASIC12.65□□□□□ -0.39
Pcdhga4Q91XY4 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.39
Pcdhga4Q91XY4 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Sv2c-203ENSMUST00000182289 2197 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Emx2os-201ENSMUST00000136990 5023 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Slamf8-201ENSMUST00000065679 1659 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Map7-202ENSMUST00000116259 3831 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Sec14l2-201ENSMUST00000003681 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Gm35721-201ENSMUST00000220294 2014 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Nisch-213ENSMUST00000168206 4990 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Brwd1-202ENSMUST00000099502 8547 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Csf1-202ENSMUST00000118593 3058 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Hoxb13-201ENSMUST00000062709 2206 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Gm10433-202ENSMUST00000146364 1984 ntTSL 2 BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Trav4-2-201ENSMUST00000103637 370 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Gm11637-201ENSMUST00000120601 592 ntBASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Shisa5-203ENSMUST00000154184 1038 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Upk2-201ENSMUST00000047740 1083 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Pik3r6-201ENSMUST00000060441 3237 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Mmp28-202ENSMUST00000103209 3438 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Ttc5-201ENSMUST00000006451 1842 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Pkp1-201ENSMUST00000027667 4669 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Chchd10-203ENSMUST00000219839 1488 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Slc29a1-209ENSMUST00000166119 1598 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Gm16793-201ENSMUST00000181322 1680 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Pou4f2-201ENSMUST00000034115 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Plch2-206ENSMUST00000135665 4349 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
Pcdhga4Q91XY4 Ccdc94-201ENSMUST00000086869 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Zfp82-201ENSMUST00000080834 2181 ntAPPRIS P3 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Fam171a1-201ENSMUST00000062934 4129 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Psme2b-201ENSMUST00000104958 837 ntAPPRIS P1 BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 A330069E16Rik-201ENSMUST00000181191 887 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Gm26927-201ENSMUST00000182385 965 ntBASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Rbms1-201ENSMUST00000028347 4436 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Scn5a-201ENSMUST00000065196 8287 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Dennd4c-202ENSMUST00000082026 7940 ntAPPRIS ALT2 TSL 5 BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 A730020E08Rik-201ENSMUST00000180421 3387 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Pcdhga4Q91XY4 Hdac5-201ENSMUST00000008999 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Zbtb44-201ENSMUST00000115222 8861 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Zfp219-202ENSMUST00000166169 3017 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Ccdc22-201ENSMUST00000033483 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Cacna1c-227ENSMUST00000220022 7765 ntTSL 5 BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Gm16177-201ENSMUST00000120728 718 ntBASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Pelp1-202ENSMUST00000135148 562 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 AC153937.1-201ENSMUST00000218734 412 ntBASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 AC134254.1-201ENSMUST00000221362 167 ntBASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Ankrd42-205ENSMUST00000138267 2827 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Pcdhga4Q91XY4 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 80.7 ms