Protein–RNA interactions for Protein: Q91W78

Usb1, U6 snRNA phosphodiesterase, mousemouse

Predictions only

Length 267 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usb1Q91W78 Atat1-212ENSMUST00000141662 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usb1Q91W78 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Usb1Q91W78 Igf2-204ENSMUST00000105936 3970 ntAPPRIS P1 TSL 2 BASIC12.71□□□□□ -0.38
Usb1Q91W78 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Usp17le-201ENSMUST00000053464 1626 ntTSL 5 BASIC12.7□□□□□ -0.38
Usb1Q91W78 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Ripk4-202ENSMUST00000113743 3743 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Coro6-204ENSMUST00000102493 2804 ntAPPRIS ALT1 TSL 5 BASIC12.7□□□□□ -0.38
Usb1Q91W78 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Prr29-204ENSMUST00000188561 592 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Usb1Q91W78 Prr29-206ENSMUST00000190795 822 ntTSL 5 BASIC12.7□□□□□ -0.38
Usb1Q91W78 Chfr-212ENSMUST00000200038 606 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Gm40466-201ENSMUST00000212174 422 ntBASIC12.7□□□□□ -0.38
Usb1Q91W78 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC12.7□□□□□ -0.38
Usb1Q91W78 AC155237.1-201ENSMUST00000226196 1279 ntBASIC12.7□□□□□ -0.38
Usb1Q91W78 AC126253.1-201ENSMUST00000227974 824 ntBASIC12.7□□□□□ -0.38
Usb1Q91W78 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.7□□□□□ -0.38
Usb1Q91W78 Nsmce1-201ENSMUST00000033006 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Lcn10-201ENSMUST00000058912 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC12.7□□□□□ -0.38
Usb1Q91W78 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Mcpt9-201ENSMUST00000095798 2000 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Got2-201ENSMUST00000034097 2530 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Prr18-202ENSMUST00000163887 3251 ntAPPRIS P1 TSL 3 BASIC12.7□□□□□ -0.38
Usb1Q91W78 Lrrc3-201ENSMUST00000057608 4296 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Gm10686-201ENSMUST00000215389 3247 ntBASIC12.7□□□□□ -0.38
Usb1Q91W78 Setdb2-205ENSMUST00000161459 2995 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Crx-203ENSMUST00000172758 1469 ntTSL 3 BASIC12.7□□□□□ -0.38
Usb1Q91W78 Gm45643-201ENSMUST00000211364 1484 ntBASIC12.7□□□□□ -0.38
Usb1Q91W78 AC131068.2-201ENSMUST00000226175 1453 ntBASIC12.7□□□□□ -0.38
Usb1Q91W78 Olfr140-202ENSMUST00000111506 3449 ntAPPRIS P1 TSL 2 BASIC12.7□□□□□ -0.38
Usb1Q91W78 Naaa-201ENSMUST00000113102 2414 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Usb1Q91W78 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Usb1Q91W78 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Usb1Q91W78 Kcnj12-203ENSMUST00000108717 2463 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usb1Q91W78 Fnbp1-206ENSMUST00000113555 1776 ntTSL 5 BASIC12.69□□□□□ -0.38
Usb1Q91W78 Dctn2-201ENSMUST00000026479 1784 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usb1Q91W78 Gtf2ird1-209ENSMUST00000171794 3524 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usb1Q91W78 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Usb1Q91W78 Mlkl-202ENSMUST00000120432 1976 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usb1Q91W78 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Usb1Q91W78 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.69□□□□□ -0.38
Usb1Q91W78 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usb1Q91W78 Gm10392-201ENSMUST00000100807 1732 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Usb1Q91W78 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usb1Q91W78 Rpl38-204ENSMUST00000106602 371 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usb1Q91W78 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC12.69□□□□□ -0.38
Usb1Q91W78 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC12.69□□□□□ -0.38
Usb1Q91W78 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Usb1Q91W78 Gm12957-201ENSMUST00000117835 377 ntBASIC12.69□□□□□ -0.38
Usb1Q91W78 Gm12203-201ENSMUST00000118235 598 ntBASIC12.69□□□□□ -0.38
Usb1Q91W78 Gm12209-201ENSMUST00000120089 596 ntBASIC12.69□□□□□ -0.38
Usb1Q91W78 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC12.69□□□□□ -0.38
Usb1Q91W78 Gm2639-201ENSMUST00000156881 1297 ntBASIC12.69□□□□□ -0.38
Usb1Q91W78 Gm4271-201ENSMUST00000174444 973 ntBASIC12.69□□□□□ -0.38
Usb1Q91W78 1700122O11Rik-201ENSMUST00000178823 771 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usb1Q91W78 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Usb1Q91W78 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC12.69□□□□□ -0.38
Usb1Q91W78 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC12.69□□□□□ -0.38
Usb1Q91W78 Gm43630-201ENSMUST00000201550 776 ntBASIC12.69□□□□□ -0.38
Usb1Q91W78 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usb1Q91W78 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC12.69□□□□□ -0.38
Usb1Q91W78 Naa10-201ENSMUST00000033763 962 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usb1Q91W78 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usb1Q91W78 Trpv4-204ENSMUST00000112222 2475 ntTSL 5 BASIC12.69□□□□□ -0.38
Usb1Q91W78 Olfr607-202ENSMUST00000214347 5706 ntAPPRIS P5 TSL 5 BASIC12.69□□□□□ -0.38
Usb1Q91W78 Kcnn2-201ENSMUST00000066890 3682 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Usb1Q91W78 Zbtb7b-201ENSMUST00000029677 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usb1Q91W78 Gm3052-202ENSMUST00000188254 2224 ntBASIC12.69□□□□□ -0.38
Usb1Q91W78 Stx3-203ENSMUST00000075304 2430 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Usb1Q91W78 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usb1Q91W78 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usb1Q91W78 Pcdhga11-201ENSMUST00000061279 4756 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Usb1Q91W78 Ocln-203ENSMUST00000159459 1950 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Usb1Q91W78 Sall4-201ENSMUST00000029061 5073 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usb1Q91W78 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usb1Q91W78 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Usb1Q91W78 Gcom1-201ENSMUST00000163998 1726 ntAPPRIS P5 TSL 5 BASIC12.68□□□□□ -0.38
Usb1Q91W78 Map1b-203ENSMUST00000223725 2669 ntBASIC12.68□□□□□ -0.38
Usb1Q91W78 Akr1d1-201ENSMUST00000040987 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usb1Q91W78 Prkar1b-202ENSMUST00000110889 2457 ntTSL 5 BASIC12.68□□□□□ -0.38
Usb1Q91W78 Tcf4-230ENSMUST00000201205 2270 ntTSL 5 BASIC12.68□□□□□ -0.38
Usb1Q91W78 Zyg11a-201ENSMUST00000043793 2289 ntAPPRIS P2 TSL 5 BASIC12.68□□□□□ -0.38
Usb1Q91W78 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usb1Q91W78 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usb1Q91W78 Cdc42se1-201ENSMUST00000053872 2805 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usb1Q91W78 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.68□□□□□ -0.38
Usb1Q91W78 Pspc1-201ENSMUST00000022507 4114 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Usb1Q91W78 Gm8617-201ENSMUST00000118796 2222 ntBASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms