Protein–RNA interactions for Protein: Q8VDS4

Rprd1a, Regulation of nuclear pre-mRNA domain-containing protein 1A, mousemouse

Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rprd1aQ8VDS4 Rbfox2-202ENSMUST00000111581 3072 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Trappc2l-201ENSMUST00000015157 1659 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Max-201ENSMUST00000082136 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Mtnr1a-201ENSMUST00000067984 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Alx4-202ENSMUST00000111254 7056 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Rpl19-ps12-201ENSMUST00000121251 591 ntBASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 6330418K02Rik-201ENSMUST00000124298 743 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Gm11851-201ENSMUST00000132219 692 ntTSL 5 BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Gm16191-202ENSMUST00000148464 484 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Gm25261-201ENSMUST00000157416 134 ntBASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 AC160029.2-201ENSMUST00000218285 548 ntTSL 3 BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Lim2-201ENSMUST00000004732 884 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Otos-201ENSMUST00000053144 704 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Rpl18a-201ENSMUST00000054220 1260 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Vmn1r213-201ENSMUST00000076897 1155 ntAPPRIS P2 BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Oraov1-201ENSMUST00000033388 2015 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Gabpb1-204ENSMUST00000103227 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
Rprd1aQ8VDS4 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rprd1aQ8VDS4 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rprd1aQ8VDS4 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rprd1aQ8VDS4 Lims1-202ENSMUST00000020078 4327 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rprd1aQ8VDS4 Acin1-202ENSMUST00000022794 2365 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
Rprd1aQ8VDS4 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rprd1aQ8VDS4 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rprd1aQ8VDS4 Zfp429-202ENSMUST00000181071 2117 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
Rprd1aQ8VDS4 Scara5-201ENSMUST00000022610 3794 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rprd1aQ8VDS4 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC13.21□□□□□ -0.3
Rprd1aQ8VDS4 Nfyc-203ENSMUST00000118902 1887 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rprd1aQ8VDS4 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
Rprd1aQ8VDS4 Bcl9l-201ENSMUST00000074989 5339 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Spib-201ENSMUST00000035323 2788 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Dhx30-201ENSMUST00000062368 3806 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 9230110C19Rik-201ENSMUST00000065291 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Malt1-202ENSMUST00000224056 4028 ntAPPRIS ALT2 BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Pyroxd2-201ENSMUST00000076505 3119 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Sbsn-201ENSMUST00000080518 2221 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Tufm-202ENSMUST00000106392 1754 ntTSL 2 BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Nup205-204ENSMUST00000201374 6411 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Gm8793-201ENSMUST00000183069 1303 ntBASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Misp-201ENSMUST00000046833 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Smpd4-206ENSMUST00000163997 1722 ntTSL 5 BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Krba1-203ENSMUST00000114571 6695 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Tsku-205ENSMUST00000167405 2597 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Gm22018-201ENSMUST00000104357 131 ntBASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Fam71f2-201ENSMUST00000115286 1180 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Gm11591-201ENSMUST00000120063 702 ntBASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Gm8099-201ENSMUST00000200510 742 ntBASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Gm32025-201ENSMUST00000217960 307 ntBASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 AC153506.3-201ENSMUST00000219287 1029 ntTSL 5 BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 4930447A16Rik-201ENSMUST00000022897 587 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Cyth1-204ENSMUST00000106305 3179 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Lztr1-201ENSMUST00000023444 3112 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 E130308A19Rik-201ENSMUST00000052420 3205 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Ampd2-202ENSMUST00000102637 3586 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 March7-203ENSMUST00000102748 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Nup62cl-201ENSMUST00000101212 1996 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Add2-202ENSMUST00000203196 1970 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC13.2□□□□□ -0.3
Rprd1aQ8VDS4 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Plekha2-204ENSMUST00000128715 3463 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Klhl30-201ENSMUST00000027533 3089 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Rprd1aQ8VDS4 Rbpj-207ENSMUST00000201883 4961 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 62.5 ms