Protein–RNA interactions for Protein: Q8VCB1

Ndc1, Nucleoporin NDC1, mousemouse

Known RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ndc1Q8VCB1 Gm37885-201ENSMUST00000192568 1391 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Mansc1-201ENSMUST00000047443 2376 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Qdpr-203ENSMUST00000118097 1232 ntTSL 5 BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Gm12241-201ENSMUST00000118330 726 ntBASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Gm38158-201ENSMUST00000194617 339 ntBASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Gm38297-201ENSMUST00000195122 1057 ntBASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Gm44364-201ENSMUST00000198368 141 ntBASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Gm6334-201ENSMUST00000207083 228 ntBASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Gm45720-201ENSMUST00000211881 484 ntTSL 3 BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 AC152453.1-201ENSMUST00000218802 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Olfr91-201ENSMUST00000087144 939 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 2810429I04Rik-203ENSMUST00000181708 4769 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Med28-205ENSMUST00000156481 4560 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Dcaf6-201ENSMUST00000027856 4110 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Acta1-201ENSMUST00000034453 1446 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Fcgr1-201ENSMUST00000029748 2589 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Tollip-204ENSMUST00000151890 1753 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Amer2-201ENSMUST00000022561 10506 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Brms1-201ENSMUST00000116567 1338 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Slc4a1ap-209ENSMUST00000202214 2806 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Ndc1Q8VCB1 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Plekhb1-203ENSMUST00000107044 1806 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Rpe-201ENSMUST00000027157 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Atg2b-201ENSMUST00000041055 7546 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 0610037L13Rik-205ENSMUST00000119394 741 ntTSL 3 BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Gm13786-201ENSMUST00000122371 333 ntBASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Gm7584-201ENSMUST00000175829 940 ntBASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 2010310C07Rik-202ENSMUST00000190889 842 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Gm18584-201ENSMUST00000203098 964 ntBASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Fgl1-201ENSMUST00000034003 1120 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Mrap-201ENSMUST00000038197 1001 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Olfr1209-201ENSMUST00000099809 933 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Elovl6-202ENSMUST00000197070 2275 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Cldn18-204ENSMUST00000136429 1409 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Sirt2-202ENSMUST00000122915 1828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 AC087890.1-201ENSMUST00000219321 1823 ntTSL 5 BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Gm5106-201ENSMUST00000181058 1334 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Zfp575-201ENSMUST00000094705 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Ctsl-201ENSMUST00000021933 1971 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Ndc1Q8VCB1 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Ndc1Q8VCB1 Pacrg-201ENSMUST00000041463 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ndc1Q8VCB1 Acot7-202ENSMUST00000075363 1457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ndc1Q8VCB1 Plcd3-201ENSMUST00000103077 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Ndc1Q8VCB1 Cgnl1-202ENSMUST00000121322 6541 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Zc3h18-201ENSMUST00000017622 3810 ntAPPRIS P4 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Pkp3-201ENSMUST00000066873 2848 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Gm15370-201ENSMUST00000117158 253 ntBASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Gm13350-201ENSMUST00000120519 479 ntBASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Gm7783-201ENSMUST00000204795 781 ntBASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Gm9257-201ENSMUST00000221254 232 ntBASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Cts7-204ENSMUST00000225321 1257 ntBASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Taf1d-201ENSMUST00000034415 1148 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Ntrk2-204ENSMUST00000224259 3049 ntBASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Ip6k1-201ENSMUST00000035214 4559 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Ndc1Q8VCB1 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms