Protein–RNA interactions for Protein: Q8R2T8

Gtf3c5, General transcription factor 3C polypeptide 5, mousemouse

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gtf3c5Q8R2T8 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gtf3c5Q8R2T8 9130019O22Rik-202ENSMUST00000164345 2735 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Gtf3c5Q8R2T8 Chrdl1-202ENSMUST00000074660 4096 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Gtf3c5Q8R2T8 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC15.22■□□□□ 0.03
Gtf3c5Q8R2T8 Gm43112-201ENSMUST00000196665 3122 ntBASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 Caln1-202ENSMUST00000111287 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 Gm8810-201ENSMUST00000172895 754 ntBASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 0610005C13Rik-209ENSMUST00000211209 974 ntTSL 2 BASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 Pfdn1-201ENSMUST00000025204 1077 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 H2-M9-202ENSMUST00000087167 1070 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 Gm6091-201ENSMUST00000098307 165 ntBASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 Pianp-206ENSMUST00000162000 2396 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 Pitpnm2-204ENSMUST00000159677 1690 ntTSL 5 BASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Gtf3c5Q8R2T8 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gtf3c5Q8R2T8 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Gtf3c5Q8R2T8 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC15.21■□□□□ 0.02
Gtf3c5Q8R2T8 Lrrn4-201ENSMUST00000049787 3715 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Pycr1-206ENSMUST00000170556 2914 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Prss8-202ENSMUST00000206124 1709 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Gm26642-201ENSMUST00000180981 2782 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Zfp618-203ENSMUST00000107415 8826 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Gm8131-201ENSMUST00000213783 1570 ntBASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Muc1-201ENSMUST00000041142 2242 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Polr2c-202ENSMUST00000211939 3881 ntTSL 2 BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Gm15444-201ENSMUST00000148335 388 ntTSL 5 BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Gm27331-201ENSMUST00000183705 60 ntBASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Otx2os1-202ENSMUST00000183803 743 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Gm43818-201ENSMUST00000200605 466 ntBASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Gm29705-201ENSMUST00000212598 474 ntBASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Degs2-201ENSMUST00000021691 1287 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 4930518P08Rik-201ENSMUST00000221281 1187 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Sh3bgrl3-201ENSMUST00000030651 743 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Tnk1-201ENSMUST00000001626 2778 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Neat1-202ENSMUST00000174287 3004 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Gm37593-201ENSMUST00000191669 3254 ntBASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 4930453N24Rik-201ENSMUST00000076991 5522 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Ube2j2-204ENSMUST00000105582 1394 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Gne-209ENSMUST00000173234 2149 ntTSL 5 BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 BC051019-201ENSMUST00000033334 1626 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Cd8a-202ENSMUST00000172321 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Zscan30-202ENSMUST00000224144 1458 ntBASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Lrp1-202ENSMUST00000118455 2097 ntTSL 5 BASIC15.2■□□□□ 0.02
Gtf3c5Q8R2T8 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gtf3c5Q8R2T8 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gtf3c5Q8R2T8 Gm11766-201ENSMUST00000143428 3018 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gtf3c5Q8R2T8 Il17rd-203ENSMUST00000225146 3366 ntBASIC15.19■□□□□ 0.02
Gtf3c5Q8R2T8 Pygm-201ENSMUST00000035269 2874 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gtf3c5Q8R2T8 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gtf3c5Q8R2T8 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gtf3c5Q8R2T8 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Gtf3c5Q8R2T8 AI661453-202ENSMUST00000150819 4866 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
Gtf3c5Q8R2T8 Clvs2-204ENSMUST00000161692 4283 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gtf3c5Q8R2T8 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC15.19■□□□□ 0.02
Gtf3c5Q8R2T8 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Gtf3c5Q8R2T8 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gtf3c5Q8R2T8 Abra-201ENSMUST00000054742 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gtf3c5Q8R2T8 Gucy1a2-201ENSMUST00000115733 2243 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Gtf3c5Q8R2T8 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Gtf3c5Q8R2T8 Ebf4-201ENSMUST00000110286 2670 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms