Protein–RNA interactions for Protein: Q8K0S5

Rtn4rl1, Reticulon-4 receptor-like 1, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtn4rl1Q8K0S5 Clcn3-204ENSMUST00000110301 4099 ntAPPRIS ALT1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rtn4rl1Q8K0S5 Gm19385-201ENSMUST00000214714 1813 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Rtn4rl1Q8K0S5 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rtn4rl1Q8K0S5 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rtn4rl1Q8K0S5 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rtn4rl1Q8K0S5 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rtn4rl1Q8K0S5 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rtn4rl1Q8K0S5 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
Rtn4rl1Q8K0S5 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rtn4rl1Q8K0S5 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.87□□□□□ -0.35
Rtn4rl1Q8K0S5 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Rtn4rl1Q8K0S5 Gm9881-201ENSMUST00000068783 3205 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Saa3-202ENSMUST00000210913 2200 ntTSL 3 BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Serpinh1-203ENSMUST00000207849 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Cdk10-212ENSMUST00000213005 1580 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 BC055324-201ENSMUST00000045876 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Dok7-203ENSMUST00000114270 2779 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Ighg2c-201ENSMUST00000103416 1214 ntAPPRIS P5 BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Zscan10-203ENSMUST00000117606 891 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Mettl1-202ENSMUST00000120542 1044 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Gm12589-201ENSMUST00000153767 638 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Ccdc127-205ENSMUST00000162672 677 ntTSL 3 BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Gm5616-201ENSMUST00000165252 384 ntBASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Gm8741-201ENSMUST00000174736 384 ntBASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Gm27627-201ENSMUST00000183644 150 ntBASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Gm21057-202ENSMUST00000206111 512 ntTSL 2 BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Gm45770-201ENSMUST00000212105 616 ntBASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Pebp4-201ENSMUST00000022678 1079 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 AC154276.3-201ENSMUST00000227643 998 ntBASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Gm36500-201ENSMUST00000221821 1626 ntTSL 5 BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Cspg5-204ENSMUST00000197850 7868 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Adamtsl4-202ENSMUST00000117782 4036 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Cd72-204ENSMUST00000107925 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Gm18626-201ENSMUST00000221512 1409 ntBASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Ptbp2-201ENSMUST00000029780 3364 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Rtn4rl1Q8K0S5 A230072I06Rik-201ENSMUST00000098935 1839 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Ankrd61-203ENSMUST00000110718 1774 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Ucp3-202ENSMUST00000107059 1260 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Hopx-202ENSMUST00000113453 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Gm11450-201ENSMUST00000121144 333 ntBASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Gm16036-201ENSMUST00000150385 1112 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Abhd14a-203ENSMUST00000171925 1122 ntTSL 3 BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Smim22-207ENSMUST00000184439 382 ntAPPRIS P3 TSL 2 BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Ino80dos-202ENSMUST00000186436 652 ntTSL 5 BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Gm9230-201ENSMUST00000188228 532 ntBASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Gm18304-201ENSMUST00000189162 546 ntBASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 4930448A20Rik-201ENSMUST00000205988 1034 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Tm2d3-201ENSMUST00000032726 908 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Ndufaf5-201ENSMUST00000044825 1166 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 S100a1-201ENSMUST00000060738 677 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Cox5a-201ENSMUST00000000090 645 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Rtn4rl1-201ENSMUST00000102514 3525 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Actn4-211ENSMUST00000217157 3530 ntTSL 5 BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Atp9a-201ENSMUST00000029060 3529 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Gm38042-201ENSMUST00000191614 5208 ntBASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Dnajc6-204ENSMUST00000106930 5127 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 BC025446-201ENSMUST00000055719 1470 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Rtn4rl1Q8K0S5 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC12.84□□□□□ -0.35
Rtn4rl1Q8K0S5 B230369F24Rik-201ENSMUST00000141846 2560 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Rtn4rl1Q8K0S5 Gm38391-201ENSMUST00000191720 4069 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 49.8 ms