Protein–RNA interactions for Protein: Q8CHD8

Rab11fip3, Rab11 family-interacting protein 3, mousemouse

Predictions only

Length 1,047 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rab11fip3Q8CHD8 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rab11fip3Q8CHD8 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rab11fip3Q8CHD8 Actr8-204ENSMUST00000224797 2328 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 Usp20-201ENSMUST00000061544 1360 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 Mknk1-201ENSMUST00000019677 2543 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 Irs1-201ENSMUST00000069799 9144 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 Nup88-201ENSMUST00000035283 2450 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 Gm14109-201ENSMUST00000118814 309 ntBASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 Pitx2-204ENSMUST00000172645 915 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 C1qtnf2-203ENSMUST00000173002 1147 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 1700040D17Rik-201ENSMUST00000181305 998 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 Gm27046-201ENSMUST00000182160 463 ntBASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 Wipf3-201ENSMUST00000126637 4414 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 Ppil2-212ENSMUST00000164458 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rab11fip3Q8CHD8 B3galnt2-201ENSMUST00000099747 3892 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 4933411K16Rik-201ENSMUST00000164518 1380 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 2700080J24Rik-201ENSMUST00000205314 1662 ntBASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Gm5939-201ENSMUST00000119613 2874 ntBASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Gm8862-201ENSMUST00000198379 1346 ntBASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Yeats2-201ENSMUST00000090052 5997 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Gm36745-201ENSMUST00000213455 1594 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Bud23-203ENSMUST00000111205 1169 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Gstp1-201ENSMUST00000169613 757 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Gm8885-201ENSMUST00000189382 598 ntBASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Gm42920-201ENSMUST00000196616 409 ntTSL 3 BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Fam168a-210ENSMUST00000216021 968 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 CT485787.1-201ENSMUST00000225617 968 ntBASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Dnajc17-201ENSMUST00000038439 1008 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Trp53-202ENSMUST00000108657 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Plekhb1-204ENSMUST00000107045 1919 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Rab11fip3Q8CHD8 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Mtch2-211ENSMUST00000150232 2377 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Gm37019-201ENSMUST00000192133 2134 ntBASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Gm7993-201ENSMUST00000200970 1384 ntBASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Prmt2-203ENSMUST00000099572 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Copb2-201ENSMUST00000035033 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Gm43823-201ENSMUST00000197391 1808 ntBASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Wdr45-204ENSMUST00000115689 1568 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Igf1-204ENSMUST00000121161 1344 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Park7-202ENSMUST00000105673 919 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Gm5638-201ENSMUST00000118618 1258 ntBASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Gm12715-201ENSMUST00000121430 1128 ntBASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Tex22-201ENSMUST00000012355 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Msrb3-202ENSMUST00000130950 561 ntTSL 3 BASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Gm14019-201ENSMUST00000131514 403 ntTSL 3 BASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Mitd1-205ENSMUST00000139725 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Gm10371-202ENSMUST00000228010 1081 ntBASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Ccs-201ENSMUST00000037246 1057 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Mir433-201ENSMUST00000093564 124 ntBASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Gm26577-201ENSMUST00000180680 2184 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Rab11fip3Q8CHD8 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rab11fip3Q8CHD8 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rab11fip3Q8CHD8 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Rab11fip3Q8CHD8 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Rab11fip3Q8CHD8 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Rab11fip3Q8CHD8 Gm45638-201ENSMUST00000211507 2878 ntBASIC16.52■□□□□ 0.23
Rab11fip3Q8CHD8 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Tspan32-203ENSMUST00000082008 1587 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Ddx27-205ENSMUST00000150571 2151 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Rab11fip3Q8CHD8 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC16.51■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 49.2 ms